Pectobacterium colocasium: PJ912_00420
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Entry
PJ912_00420 CDS
T08961
Name
(GenBank) autotransporter domain-containing protein
Organism
pcoa
Pectobacterium colocasium
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M28
Autotransporter
Peptidase_M20
MLLE
Motif
Other DBs
NCBI-ProteinID:
WED68853
LinkDB
All DBs
Position
complement(64686..66638)
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AA seq
650 aa
AA seq
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MFKQVAVAVGMACLSIPAWAYDYGDYARETVDTLINDYPGRYRGTANFAGAADWMTQRMA
PGYTTVRQDFSWTAGGTTRSSQNVLASNVGLSSEYIITGAHFDTFFGQPTLQGLDDNASG
ASILTEVARNFSGIQTEKTLVFAAFGAEEEGLRGSRAMVNDLIAQGTAGGLTAMINMDSM
ITGDKLYAHAGNNSVANPALTSLREQTLRIANELGIELFTNPGLNASYPAGTGCCSDGDS
FNAAFAIPVLYMEATNWDIGDQDGYEQTTNPAVPGGATWHDPTVDNEAFLTSVLGQERID
QRLRDVSRLVTRLLLEISNTDLLHSAYSAAAMQQAMEESLKRQRQSLSDLHNQRWLLLQN
TPRSVGTLDTAVGIEGDVTPSNGFDRAPQQRSRQAMAYALVDYQLSDGVTIGGSLSLLRS
KDKLERNGHIESDTWQASVYGLLNQGGPAWLGSDVTAGRAAIASRRSVYLQSAGGPVLLD
NTLDGNTEAQFVGARVTGGYDFPLGGLRTGPVAGLDYARYRINAFDDKGNLRTGVRYEKQ
DVDSLEASLGWRVRGKVEFSNNASLQPYATVAWVRELADGLDSSFTVKDRVDGANRRIAV
GEQDKNFGRATVGVQWLAAENLNLYSEVGSRFGHRDGDQTRYSVGVQWQF
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atgttcaagcaagtcgcagttgcggtagggatggcgtgtttatctataccagcatgggct
tatgattacggtgattatgcgcgcgagaccgtagatacgctcattaatgattatccgggg
cgctatcgcggtacggcaaattttgccggtgcggcggactggatgacgcagcggatggca
cccggttataccactgtcaggcaggatttctcctggacggcaggcggtacgacgcgttcg
tcacagaatgtgctggcctctaatgtcgggctgagcagcgaatacattattactggcgcg
cactttgataccttcttcgggcagccgacgttgcaagggctggatgacaacgcatccggt
gcatcgatcctgacagaagtggcgcgtaattttagcggcatccagacggagaaaacgctg
gtctttgcggccttcggggcagaagaagaagggctacgcggttcgcgtgcaatggttaac
gatctgattgcgcaaggaacggctggcggccttacggccatgattaacatggacagcatg
attaccggcgacaaactctacgcgcatgctggcaataacagcgtagcgaatcctgcgctg
acaagcctgcgtgagcagacgttgcgtatcgcgaatgaattgggcatcgaactgtttacc
aacccaggattgaatgcgagttatccggcgggaactggctgttgcagtgacggcgatagc
ttcaacgccgcgtttgctattcccgtactctatatggaggccaccaactgggatatcggc
gatcaggacggctatgagcaaactacgaaccctgcggtgccggggggcgcgacatggcat
gaccctacggttgataacgaagcctttctgaccagcgtgctgggtcaggaacgcattgac
cagcgcctgcgtgacgtttcacggttggtgacacgactgctactggaaatttccaatacc
gatttgctgcattcggcctattccgccgctgcgatgcaacaggcaatggaggagagcctg
aagcgtcagcgccaatcattgagtgatttgcataatcagcgctggctgctgctgcaaaat
acccctcgcagcgtaggtacgctggatacggcagtcgggattgaaggcgatgtgaccccg
tcaaatggctttgaccgcgcaccgcagcagcgttcccgtcaggcgatggcttatgcacta
gtcgattatcaattaagtgacggcgtcactattggtggcagcctgagcctgctgcgtagc
aaggataagcttgagcgtaatggacatattgaaagcgatacctggcaagctagcgtctat
ggtttgctgaatcagggcggtccagcctggttgggtagcgacgtgacggcgggccgggcg
gcgattgcgtcacgccgctcggtgtatctgcaatctgcgggcggaccggtgctgttggac
aacacgctggacggcaataccgaagcgcaatttgtcggtgcccgcgtaactggcggctat
gattttccgctaggcggattgcgcaccggtccggttgccgggttggattatgcgcgttat
cgcatcaatgcgtttgatgataaaggtaacctgcgaactggcgtgcggtatgaaaaacag
gatgtggattcgctggaagccagtctgggctggcgcgtgcgcggtaaggtggaattcagc
aacaacgcgtcgctacaaccttatgctacggtggcgtgggtgcgtgaattggctgatggg
ctcgattccagctttacagtgaaagatcgcgtcgatggtgcaaaccgccgtattgcggtt
ggggagcaggataagaactttggtcgcgcaaccgttggtgtgcagtggcttgcggcagaa
aacctgaatctgtattccgaggtcggtagccgtttcggccatcgggatggcgatcaaacg
cgctatagcgtaggcgtacagtggcaattctaa
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