Pectobacterium colocasium: PJ912_01005
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Entry
PJ912_01005 CDS
T08961
Name
(GenBank) ABC transporter permease
KO
K02054
putative spermidine/putrescine transport system permease protein
Organism
pcoa
Pectobacterium colocasium
Pathway
pcoa02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pcoa00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PJ912_01005
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcoa02000
]
PJ912_01005
Transporters [BR:
pcoa02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
PJ912_01005
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
Motif
Other DBs
NCBI-ProteinID:
WED68925
LinkDB
All DBs
Position
complement(175424..176692)
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AA seq
422 aa
AA seq
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MSQSDIAAAVPSGGNEENSTLKQQLWLAQKAYKKRSLLLIAPLFLFIVVSFLFPITSILG
KSVSNPELRDNMPQTIAAMRQWSGNDVPDETVFRALVGDLRDARSSGKLSTITKRLGYEG
AEYRTLITRTLRKLPAEGSSDMRDQLIREQPMWGELATWKTFDRAARPFTSYYLLAVFDH
KVDATTQQIVPQPADQALYVDVLLRTLLMAGVVTLLCVGLGYPLAYWLAKQPSNRANLLL
ILVLLPFWTSLIVRTASWIVLLQSGGLINRSLMNIGIIDEPLVLVFNRIGVYISMTHILL
PFFILPLYAVMKGISPNYVRAAVSLGAHPFIAFWRVYVPQTYAGVTAGALLVFMMAIGYY
ITPALLGGPSDQMLSYFVAFFTNTTMNWGMAAALGTQLLIIVTLLYVVYIRVTRTNAEAA
AH
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atgtcccagagcgatatcgccgccgctgtgccgtctggcggaaacgaggaaaactcgacc
ttgaagcagcaactgtggctcgcgcagaaagcctataaaaaacgctctctgctgctgatt
gcaccgctgtttctgtttatcgtggtgagttttctcttcccgatcacctctattttgggg
aaaagcgtctccaatccggaattacgcgacaatatgccacagaccattgctgcgatgcgg
caatggtcgggcaacgatgtaccggatgaaaccgtctttcgggcgctggtcggcgatctg
cgtgacgcccgcagcagcggtaagttaagcacgattaccaaacggctagggtatgaaggc
gcggaataccgcacgctgattacccgcacattgcgtaagctgcccgctgagggcagcagc
gacatgcgcgatcaactgatacgcgagcagccgatgtggggagaattagcgacctggaaa
acgttcgatcgcgcagcgcgaccttttaccagctattacctgttggcggtgtttgaccat
aaagtggatgccaccacgcagcagattgtcccgcagcctgccgatcaggcgctgtatgtg
gacgtgctgctgcgcacgctgctgatggcgggcgtggtaacactgctgtgcgtggggctg
ggatatccgctggcgtactggctggcgaagcagccctctaaccgcgccaatctgttgctg
attctggtgctgctaccgttctggacatcactgatcgtgcgcaccgcgagttggattgtg
ctgttgcagtctggtgggttgattaaccgttcgctgatgaatatcggcattatcgatgaa
ccgttggtgctggtgttcaaccgtatcggtgtctacatttcgatgacccacatcctgcta
ccgttcttcattttgccgctgtacgcggtgatgaaaggtatttccccgaattatgtgcgg
gcagccgtttcgctgggcgcgcatccgtttattgctttctggcgggtttatgtgccgcaa
acctacgccggtgtgacggcaggggcgctgctggtctttatgatggcgattggctactac
attacgccggcgctgctgggcgggccgagcgaccagatgctgagttattttgtcgcgttc
ttcaccaataccaccatgaactggggaatggcggccgcgttagggacacaactgctgata
atcgtgacgctgctgtacgtggtgtacatccgggtcacgcgtactaatgcggaagccgcg
gcgcactaa
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