Pectobacterium colocasium: PJ912_01025
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Entry
PJ912_01025 CDS
T08961
Name
(GenBank) PLP-dependent aminotransferase family protein
KO
K00375
GntR family transcriptional regulator / MocR family aminotransferase
Organism
pcoa
Pectobacterium colocasium
Brite
KEGG Orthology (KO) [BR:
pcoa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcoa03000
]
PJ912_01025
Transcription factors [BR:
pcoa03000
]
Prokaryotic type
Helix-turn-helix
GntR family
PJ912_01025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
GntR
HTH_24
HTH_41
HTH_11
Beta_elim_lyase
HTH_Crp_2
DnaD_N
Rrf2
HTH_36
Motif
Other DBs
NCBI-ProteinID:
WED68926
LinkDB
All DBs
Position
181022..182515
Genome browser
AA seq
497 aa
AA seq
DB search
MRSLLTDLLLQRLANQHDGALNKRLYDCIRLAILDGAITAGERLPSSRDLAQQLSLSRNT
VLTAYEQLLAEGYIEARKGSGTFVTEQLPDGNMQPISSDNAGEIREPKHELSRRGMHLLG
YAGASARQWGAFMPGIPDIASFPHDLWRRIQTRLTRRVRPEQLSYSPIGGCPELQLALVD
YLRVARSVECTPEQILITEGTHQAMDLLAKMLCNPGDLAWIEDPCYWGIRNVLTINGLRV
APVDVDEQGLVPPDTLSPNAAPRLICVTPSHQYPLGAVMSLARRQRLLALAQEHGCWVVE
DDYDSEFRFSGSPIPALQGLQAQSPVIYIGTFSKTLYPGLRVSYMVLPPLLAQSLKTAHS
ELYRGGHWLTQATLAQFIREGHYAAHIRRMRLLYAKRRALLTSLIEQHLGADYVGDNSNA
GLHMLLSLPPHIDDVVLSAAILRRGVMVKPLSSYYLQPTQQRGLLLGYASVEESHMTQAF
SAIVACIQALDSRHSEA
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
ttgcgctcacttctgaccgacttattgctacagcgtttagccaaccagcacgacggcgcg
ctaaacaaacgtttgtacgactgcattcggctagcaattcttgatggcgcgattaccgct
ggcgagcgcctgccgtcgtcgcgcgatctggcgcagcagctatcgctgtcgcgcaatacc
gtgctgaccgcttacgaacagctcctggcagaaggctatattgaagcacgcaaaggaagc
gggactttcgtcacggaacagttgcccgatggcaacatgcagccgataagcagcgacaac
gccggagaaatccgtgaacctaaacatgaattatcgcgtcgcggtatgcatcttctgggc
tatgccggcgcctccgcccgccaatggggcgcgtttatgccgggcatcccggatatcgcc
agctttcctcacgatttgtggcgacggattcaaacacgactgacgcgtcgcgttcgccct
gagcagctttcctattcgccgattggcggctgtcccgaactgcaattggcgctggtagat
tacctgcgcgtcgcccgctccgtcgaatgcacgccggagcagattctgattaccgaaggc
acgcatcaggcgatggatttgctggctaaaatgctgtgtaaccccggcgatttggcgtgg
attgaagatccctgctattggggaattcgtaatgtcctgacgattaatggcctgcgcgtc
gcccccgtcgacgtcgatgaacaggggctggtgccgccggacacgctctcacccaacgca
gccccacgtctgatttgcgtgacaccgtcacatcaatatccattgggcgcggtgatgagt
ctggcacggcgtcaacgtctgctggcactggcgcaagagcacggctgctgggtggtggaa
gatgactacgacagcgagttccgcttctccggcagtccgattcccgcgctgcaagggcta
caggcacagtcgccggtgatctacatcgggacattcagcaaaacgctctaccccggcctg
cgcgtcagctacatggtgctgccaccgctgctggcgcagtcgctgaagacggcacattct
gagctctatcgcggcggacactggctcacgcaggcgacgctcgcgcagtttatccgcgaa
ggccactacgctgcgcatatccgtcgtatgcgcctgctgtatgccaagcgccgcgcgcta
ttgacgtcgttaattgaacaacatctgggcgcggattacgtcggggacaacagcaacgcc
gggctgcatatgctgctcagtctgcctcctcacatcgacgatgtcgtattgagcgccgcg
attttgcgccgcggcgtgatggttaaaccgctttccagctactacctgcaaccgacacag
cagcgtggtttattactgggctacgccagcgtggaagagagccacatgacgcaggcgttt
tccgcaatcgtggcctgtattcaggcgctagattcacgccattccgaggcctga
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