Pectobacterium colocasium: PJ912_02825
Help
Entry
PJ912_02825 CDS
T08961
Symbol
ompA
Name
(GenBank) porin OmpA
KO
K03286
OmpA-OmpF porin, OOP family
Organism
pcoa
Pectobacterium colocasium
Brite
KEGG Orthology (KO) [BR:
pcoa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcoa02000
]
PJ912_02825 (ompA)
Transporters [BR:
pcoa02000
]
Other transporters
Pores ion channels [TC:
1
]
PJ912_02825 (ompA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA_membrane
OmpA
OMP_b-brl
Porin_1
DEC-1_N
AAA
Motif
Other DBs
NCBI-ProteinID:
WED69114
LinkDB
All DBs
Position
521658..522746
Genome browser
AA seq
362 aa
AA seq
DB search
MKKTAIAVAVALASFATVAQAAPKDNTWYTGGKLGVSQFHDTGFYGNGYTGIVNNPIKSK
LGAGAFVGYQANPYLGFELGYDWLGRMKYAGSTANAADSASFKAQGIQLAAKLSYPVMPN
LDVYTRLGGMVWSADSHAAINGGDINNDDTGVSPLAAIGVEYAIDKNWAARVDYQWVSNI
GDAGTVGARPDNLLMSVGLSYRFGQDDRVVAPVVAPAPTPAPAPVVETKRFTLKSDVLFN
FNKATLKAEGQQSLDQLYTQLSSLDPKDGSVVVLGFTDRLGSDQYNQALSEKRAQSVVDY
LVSKGIPANKISARGQGKSHPVTGSTCDNVKPRAALIDCLAPDRRVEIEVKGIKDVVTQP
QA
NT seq
1089 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaacagctatcgcagttgcagtggcactggctagcttcgcgaccgtcgcgcaa
gcagctcctaaagacaatacctggtacaccggtggtaaactgggtgtgtctcaattccac
gatacgggtttctacggcaatggttacaccggtatcgttaacaacccgatcaaaagcaag
ttaggcgctggtgcatttgttggttatcaagccaacccgtacctgggctttgaactgggc
tacgactggctgggccgcatgaagtatgcaggttctactgctaacgcagcagacagcgcg
agcttcaaggcacagggcatccaactggctgctaaactgagctacccagttatgcctaat
ctggacgtttatactcgtctgggcggcatggtatggagcgctgacagccacgcggccatc
aacggcggcgacatcaacaatgacgacactggcgtttctccgctggctgcgatcggtgtt
gaatacgctatcgacaaaaactgggctgcacgtgttgactaccaatgggtaagcaacatt
ggtgatgcaggtaccgttggtgcccgtccagacaacctgctgatgagcgttggcctgtct
taccgtttcggccaagatgaccgtgtagtagcgccagttgttgctccggccccaacccca
gctccggctccagttgttgaaaccaagcgtttcacgctgaaatctgacgtcctgttcaac
ttcaacaaagcaacgctgaaagcagaaggccagcaatcactggatcaactgtacactcag
ctgagctctctggatccgaaagatggttctgttgttgttctgggcttcactgaccgttta
ggttcagaccaatacaaccaagccctgtctgaaaaacgtgcacagagcgtcgtggattac
ctggtttctaaaggtatccctgcgaacaaaatctctgctcgtggccagggtaaatctcac
cctgttaccggttctacctgtgacaacgtgaagcctcgtgctgcgctgatcgactgcctg
gcaccagatcgtcgcgtagagatcgaagttaaaggcatcaaagacgttgtaactcagcct
caggcttaa
DBGET
integrated database retrieval system
