Pectobacterium colocasium: PJ912_07805
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Entry
PJ912_07805 CDS
T08961
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
pcoa
Pectobacterium colocasium
Pathway
pcoa00300
Lysine biosynthesis
pcoa00470
D-Amino acid metabolism
pcoa01100
Metabolic pathways
pcoa01110
Biosynthesis of secondary metabolites
pcoa01120
Microbial metabolism in diverse environments
pcoa01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
pcoa00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
PJ912_07805 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PJ912_07805 (lysA)
Enzymes [BR:
pcoa01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
PJ912_07805 (lysA)
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Paralog
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GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-ProteinID:
WED69600
LinkDB
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Position
complement(1475161..1476423)
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AA seq
420 aa
AA seq
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MPHDLNDVTHALNAQSLRELPARFGCPVWAYDAQTIVNRIAQLRQFDTIRFAQKACSNTH
ILRLMREQGVKVDSVSLGEIERALIAGFVPGTDAHEIVFTADLLDRPTLQRVAELNIPVN
AGSVDMLEQLGQQSPGHPVWLRVNPGFGHGHSQKTNTGGENSKHGIWYGDLPLALAHIQR
YQLKLVGIHMHIGSGVDYGHLEQVCEAMVRQVVELGQDIEAISAGGGLSIPYRHGEEAID
TEHYYGLWNAAREKIAAHLGHPVTLEIEPGRFLVAESGVLVAEVRAIKSMGSRHFVLVDA
GFNDLMRPAMYGSYHHVSLLPGDGRDISQSTLRDSVIAGPLCESGDVFTQQAGGGVETFA
LPDAQVGDYLVFHDTGAYGASMSSNYNSRPLLPEVLFENGEPRLIRRRQTLDELLALEAL
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgccccacgatctgaatgacgtaacacatgcgctgaacgcgcaaagcctgcgtgaactg
cctgcccgctttggttgtccggtttgggcctatgacgcgcaaactatcgttaaccgtatc
gcccaactgcgccagttcgacacgatccgctttgcgcagaaggcgtgttccaacacgcac
attttgcgtctgatgcgtgagcagggtgtaaaagtcgattcggtatcgctgggtgagatc
gagcgtgcgttgattgcaggctttgtgccgggcaccgatgcacatgagatcgtgtttact
gccgatctgttggatcgtccgacgctacagcgcgttgctgaactgaatattccggtgaac
gccggttcggtcgatatgctggaacagttgggtcagcagtcgccggggcatccggtgtgg
ctgcgcgtgaatccgggctttggtcatggtcacagccagaaaaccaataccggcggcgag
aacagcaagcatggcatctggtacggcgatttgccgctggcgctggcacacattcagcgc
tatcagctgaagctggtgggcatccacatgcatatcggttccggtgttgattacggtcat
ctggagcaggtgtgtgaggcgatggtgcgccaggtcgttgagctgggtcaggatatcgag
gcgatttcagcgggtggcggactgtcgattccgtatcgccacggcgaagaagcgattgat
accgaacactattacggcctgtggaacgcggcgcgtgagaaaattgccgcgcatcttggc
catccggtgacgttggaaatcgagccaggacgttttctggtcgcggaatccggcgtgttg
gtcgcggaagtacgggcgatcaaatccatggggagccgccactttgtgctggtggatgcc
gggtttaacgacctgatgcgtccggcgatgtacggcagctatcaccatgtttctctgctg
ccgggcgatggccgtgatatcagccagtccaccttgcgcgatagcgtgattgccgggccg
ctgtgtgaatccggcgatgtgtttacccagcaggcgggcggcggcgtggaaacgttcgcg
ctgccggatgctcaggttggcgactatctggtcttccatgacaccggcgcgtacggtgca
tccatgtcctctaactacaacagccgtccgctgctgccggaagtgctgtttgaaaatggc
gagccgcgcctgattcgccgccgtcagacgctggacgagctactggcgctggaagcgctt
taa
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