Pectobacterium colocasium: PJ912_07885
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Entry
PJ912_07885 CDS
T08961
Symbol
alr
Name
(GenBank) alanine racemase
KO
K01775
alanine racemase [EC:
5.1.1.1
]
Organism
pcoa
Pectobacterium colocasium
Pathway
pcoa00470
D-Amino acid metabolism
pcoa01100
Metabolic pathways
pcoa01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
pcoa00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PJ912_07885 (alr)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
PJ912_07885 (alr)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pcoa01011
]
PJ912_07885 (alr)
Enzymes [BR:
pcoa01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.1 alanine racemase
PJ912_07885 (alr)
Peptidoglycan biosynthesis and degradation proteins [BR:
pcoa01011
]
Precursor biosynthesis
Racemase
PJ912_07885 (alr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ala_racemase_N
Ala_racemase_C
DUF7388
Motif
Other DBs
NCBI-ProteinID:
WED69610
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All DBs
Position
1489356..1490438
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AA seq
360 aa
AA seq
DB search
MKTATAVINRRALRHNLQRIRQLAPGSQVVAIVKANAYGHGMIDAAHTFCDADCYGVARL
SEALALRAAGITKPIVLLEGFFSADDLPLLVEHQLETAVHSPEQLAALEQATLSQPLRVW
MKLDTGMHRLGVLPEHADAFWQHLTACRNVVQPVNIMSHFSRADEPEAGTTERQLACFDA
FTQDKPGAQSIAASGGILLWPQSHRDRVRPGIILYGVSPLDNEDAAHFGFQPAMTFTSHL
IAVREHHAGEAVGYGGIWTSPRNTRLGVVAVGYGDGYPRCAPAGTPVLINGREVPLSGRV
SMDMITVDLGPDAQDKVGDEVILWGPTLPVERIAAHTGASAYELITRLTQRTVLEYVDGE
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacggcaactgccgtcattaaccggcgtgctttgcgccacaacctgcaacgtatc
cgccagctcgcgcctggcagccaggtcgttgccatcgtgaaagccaacgcctatggccac
ggtatgatcgacgctgcccatactttttgcgacgctgactgctacggtgtcgcacgcctc
tccgaagcgctggcgttgcgcgcggcgggcatcaccaagcctatcgtcctgctggaaggc
tttttctccgccgacgaccttccgcttctggtcgagcaccagctagaaaccgccgttcac
agccccgaacagcttgccgcgctggagcaggctacgctgtcacagccgctacgcgtgtgg
atgaagctcgataccggtatgcaccggcttggcgttctgccggaacacgccgacgcgttt
tggcagcacctgaccgcatgtcgcaatgtggttcagccggtcaatatcatgagccacttt
tcccgcgccgatgagcccgaagccggcaccaccgaacgccagttggcctgcttcgatgcc
tttacgcaggataaacccggcgcacagtccatcgcagcctccggcggcattctgctgtgg
ccgcagtcgcaccgcgatcgcgtccgccctggcatcattctctatggcgtgtcgccgctg
gataacgaagacgccgcgcatttcggcttccagcctgcgatgacctttacgtcgcacctg
atcgccgttcgcgaacaccacgcgggcgaggcggtcggttacggcggcatctggaccagc
ccgcgcaatactcgtctgggcgtggtcgccgtcggctacggtgatggctacccgcgctgc
gcgccagctggcacgcccgtgctcatcaacgggcgtgaggtgccgctttccggccgcgta
tcgatggatatgatcacggtggatttagggccggatgcgcaggacaaggttggcgatgaa
gtcatcctgtgggggccgacgctaccggttgaacgcattgccgcgcatacaggcgccagc
gcctacgaactgattacgcgcttaacacagcgcaccgtattggaatacgtcgacggtgag
taa
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