Pectobacterium colocasium: PJ912_09425
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Entry
PJ912_09425 CDS
T08961
Name
(GenBank) DNA topoisomerase III
KO
K03169
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
pcoa
Pectobacterium colocasium
Brite
KEGG Orthology (KO) [BR:
pcoa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pcoa03032
]
PJ912_09425
Enzymes [BR:
pcoa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
PJ912_09425
DNA replication proteins [BR:
pcoa03032
]
Prokaryotic type
DNA Topoisomerases
PJ912_09425
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Zn_ribbon_Top1
Toprim_4
Zn_ribbon_recom
Zn_ribbon_TFIIB
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
WED69765
LinkDB
All DBs
Position
1810641..1812653
Genome browser
AA seq
670 aa
AA seq
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MKLFLCEKPSQGKDIGRVLGATQRGKGCLTGSGITITWCIGHLVEAAPPDAYGEQYKRWS
IEQLPIIPERWRVDVKSKTASQFNVVKDLLSKASELVIATDADREGELIAREIIELCGYR
GPIQRLWLSALNDASIRKALATLRPSSETMPMYFSALARSRADWLIGMNLSRLFTVMGRQ
AGYDGVLSVGRVQTPTLKLVVDRDREIACFVSVPFWAVETVLSSAGQSFTAAWLAPDTAT
DDAGRCLQEPIARQAVERMRSAGSAQITSVETERMREGPPLPFDLGTLQEICSKQLGLDV
QETLEIAQALYETHKATTYPRSDSGYLPDSMFAEVPTVLDSLLKTDPGLRPLVDKLDRNQ
RSRVWNDSKVTAHHGIIPTLEPANLKAMSDKERAVYMLIRAHYLAQFLPQHEFDRTTARL
SCAGETLQAVGKQVVVIGWRQVLAEPRPDDDGETTPRSQVLPALHEGLSCQITGIDCKAL
KTSPPRPYTQGELVKAMKGVAKLVADPRLKQKLKDTTGIGTEATRANIIKGLLDRGYLQK
KGRSVRASDAAFTLIDAVPGAIADPGMTAIWEQALDMIEAGQLTLDVFIDKQSAWITQLV
QQYRGASLSIKVPQGPACPECGTAMRQRTGKSGPFWSCPRYPDCKGSQPIDNGKHKRAMP
RKRNSSTRAS
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgaagctatttctgtgcgagaagccctcccagggcaaagatatcggacgtgtactgggg
gctacccaacgaggcaagggttgcctcaccggttcaggtatcaccataacctggtgcatc
ggtcatctcgttgaagcagcaccgcccgatgcctatggcgagcagtacaaacgctggtct
atcgagcaattgcccattatccctgagcgctggcgcgtcgacgtcaaatccaagaccgcc
tcgcagttcaacgtcgtcaaagaccttctgagcaaggcaagcgaactggtcatcgcaacg
gatgctgacagggaaggcgagttgatcgcacgtgagatcatcgaactgtgcggttatcgc
ggccccatccagcggctctggttatcggcattaaatgacgcgtcgatccgcaaagcactg
gcaacgctcaggccatcaagcgaaaccatgccgatgtacttctcggccttggcacgttcc
cgcgcagactggctgattggcatgaatctcagtcgcctgttcaccgttatggggcggcag
gccggttacgatggcgtcctctccgtgggccgggtacaaaccccaacgctgaaactggtt
gtcgatcgcgaccgcgagatcgcatgctttgtctctgtaccgttctgggcagtcgagacc
gtactatcgagcgcaggtcaatctttcactgcagcctggcttgcaccagatacagcaaca
gacgatgccggccgctgcctgcaggagcccatagcccggcaggcagtagagcgcatgcgt
tcggctggtagcgcccagatcacgtccgtcgaaactgaacgcatgcgtgaaggcccaccg
ttacccttcgatctgggcacgctgcaagaaatctgctcaaaacagttgggcctggacgtg
caggaaaccctggaaatcgctcaggcactgtacgaaactcacaaagcgacgacgtatccg
cgctcagactccggctatctgcccgacagcatgttcgccgaggtgcccaccgtactcgac
agtcttctcaaaaccgatcctggcctgcgaccgctcgttgacaagctagaccgcaaccag
cgctcacgtgtatggaacgacagcaaagtcacggcgcaccacggcatcattcccacgctc
gaacccgccaaccttaaggcaatgagtgacaaggaacgggcagtctatatgctgatccgt
gcccactatctggcgcagtttctgccgcaacatgagtttgaccgcaccactgcacgctta
tcctgtgcgggtgaaacgctacaggctgtcggcaagcaggtcgtcgtcatcgggtggcgg
caggtactcgctgagcccaggccagacgatgatggcgagaccactccgcgcagccaggtt
ctgccagcgctgcatgaaggtttgtcttgccagatcactggaatcgactgcaaagcgctc
aagacatcgccgccacgtccttatacccagggcgaactggtcaaagcgatgaagggcgtt
gccaaattggttgccgatccacgcctgaagcaaaagctgaaggacaccacgggtatcggc
actgaggcgactcgcgccaatatcatcaaaggattgcttgaccgtggctacctgcagaag
aaaggccgttcggtacgtgcctccgatgcggcattcacactcatcgacgccgttcccggt
gccattgccgatcccggcatgaccgccatctgggaacaggcgctggacatgatcgaagcc
ggtcagctcactcttgatgtcttcatcgacaagcagtcagcctggatcacgcagttggta
cagcagtatcgaggagcatcgctgtctatcaaggtgccacagggacctgcatgcccagaa
tgcggcaccgctatgcgtcagcgtactggcaaaagcgggccattctggtcttgccctcgc
tatcctgactgcaaaggctctcagcctatcgacaacggcaaacacaaacgtgctatgccg
cgcaaacgtaacagcagcacacgggcatcctga
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