Pectobacterium colocasium: PJ912_10420
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Entry
PJ912_10420 CDS
T08961
Name
(GenBank) transporter substrate-binding domain-containing protein
KO
K10018
octopine/nopaline transport system substrate-binding protein
Organism
pcoa
Pectobacterium colocasium
Pathway
pcoa02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pcoa00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
PJ912_10420
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcoa02000
]
PJ912_10420
Transporters [BR:
pcoa02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Octopine/nopaline transporter
PJ912_10420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_3
Lig_chan-Glu_bd
UPF0020
Motif
Other DBs
NCBI-ProteinID:
WED69861
LinkDB
All DBs
Position
2000290..2001159
Genome browser
AA seq
289 aa
AA seq
DB search
MIKSKLTLLACSLCMAGTLAASFTASAEEKKWTTVRIATEGAYHPYNFTKPDGTLDGMEI
ELYKVLCNNMQVKCEIMVQPFTSTIPALNAGKFDAIISGMSATEKRREVIDFSQPYTQAG
QTFAVLKSSKLAKDFPDAGQRFSINPADEATAKAEIEKLKPLLEGKTIGVQSASIASAFL
DKYMKGVMKVREYKTTQEHDLDLKAGRVDLVIASAPYLKSISEKPGNADIVTPGPQFIGG
ILGSGSSVGLRKSDPELKAMFDKAIDQAKQDGTIRKLSEKWFGMDTTPL
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaatcaaaactgactctgctcgcctgctcgctgtgcatggcaggcacgctggcc
gcctcattcaccgcctcagcggaagagaagaaatggacgaccgtccgcatcgccaccgaa
ggcgcttatcacccgtataacttcaccaagccagacggcacgctggatggcatggagatc
gaactgtacaaagtgctgtgtaacaacatgcaggtgaaatgcgagatcatggtgcagcca
ttcaccagcaccatccctgccctgaatgccggtaagttcgacgccatcatttctggtatg
tccgccacggaaaaacgccgtgaggtgatcgatttcagccagccgtacacgcaggcagga
cagactttcgccgtgctgaaatccagcaaactcgctaaagatttcccagacgcgggccag
cgtttctccattaacccggccgacgaagccaccgcaaaagctgaaattgagaagctgaaa
ccactgctggaaggcaaaaccatcggcgtgcagtcagcctctatcgccagcgcctttttg
gataaatatatgaaaggcgtgatgaaagtacgtgaatataaaaccactcaagaacacgat
ctggatctgaaagcgggtcgtgtggatctggttatcgcttccgcgccttacctgaaaagc
atttcggaaaaaccgggcaatgccgatatcgtcacgccgggaccacagttcatcggcggc
attttgggcagcggctcttccgttggcctgcgtaagagcgatcctgagctgaaagctatg
ttcgacaaggccatcgatcaggctaagcaagacggtacgatcagaaaactgagcgaaaaa
tggttcggtatggacaccacaccactctga
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