Pectobacterium colocasium: PJ912_10870
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Entry
PJ912_10870 CDS
T08961
Symbol
gntR
Name
(GenBank) gluconate operon transcriptional repressor GntR
KO
K06145
LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
Organism
pcoa
Pectobacterium colocasium
Brite
KEGG Orthology (KO) [BR:
pcoa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcoa03000
]
PJ912_10870 (gntR)
Transcription factors [BR:
pcoa03000
]
Prokaryotic type
Helix-turn-helix
LacI family
PJ912_10870 (gntR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_1
Peripla_BP_3
LacI
Peripla_BP_4
HTH_3
HTH_10
HTH_24
HTH_23
HTH_IclR
HTH_26
HTH_7
Motif
Other DBs
NCBI-ProteinID:
WED69915
LinkDB
All DBs
Position
complement(2091532..2092527)
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AA seq
331 aa
AA seq
DB search
MKKKRPVLQDVADRVGITKMTVSRYLRNPAQVSAALQEKIAIALDELGYIPNLAPNMLAS
STSRAIGVLLPSLTNQVFAEVLRGIERTAEAHGYQTMLAHYGYHPDREEQRLTSLLSYHI
DGLILAERTHTPRTRQMLDVAGIPVVELMDSVSPCLDMAVGFDNVEAARQMTLRMVALGH
RHIVYLGARQDERTIMRCRGYEQAMWESGLKSYCVMSERASSYSLGGELLRQTQSEYPQV
DSVFCTNDDLAVGAMFECQRQGLRVPEDIGVAGFHGHDIGQAMVPKLASVLTPREHMGRV
GTEHLLARLRGEPVAQGMVDVGFTVLDGESL
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaaaaaagacccgttctccaggacgttgctgaccgcgttgggattaccaaaatg
acggtaagccgctatttgcgtaaccctgcgcaggtgtcagccgcgttgcaggaaaagatc
gctattgcattggatgagctgggctatattcccaatctcgcgccgaatatgcttgccagc
tccaccagtcgggcgattggggtgctgctgccgtcattaaccaatcaggttttcgctgag
gtattgcgcggtattgaacgcacggcggaagcgcacggctaccagactatgctggcacac
tatggctatcatcctgacagagaagaacagcgcctgacgtcactgctgtcgtatcacatc
gatgggcttattctggccgaacgcactcacacgccgcgaacgcgccagatgctggatgtc
gccggcattccggtggtggaactgatggattccgtctcgccctgtctggatatggctgtc
ggatttgataacgttgaagccgcgcgtcagatgacgctgcgtatggttgcgctggggcac
cgtcatatcgtctatctcggggcgcggcaggatgagcgtacgattatgcgctgccggggc
tatgaacaagcgatgtgggaaagcgggctcaaaagctattgcgtgatgagcgaacgggca
tcttcctattcactcggtggcgaactgctgcggcagacgcagtcggaatacccgcaggtc
gatagcgtattttgcaccaatgacgatttagccgtcggcgcaatgtttgaatgccagcgc
cagggattgcgcgtgccggaagatattggcgtagcgggtttccacggacacgacattggt
caggcgatggtgccgaagctggctagcgtactgacgccgcgtgagcacatggggcgtgtc
ggcaccgagcatttgctggctcgtctacggggcgagccagttgcgcagggcatggtcgat
gtcggttttaccgtgctggacggcgaaagcctttaa
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