Pectobacterium colocasium: PJ912_11820
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Entry
PJ912_11820 CDS
T08961
Symbol
ygbI
Name
(GenBank) DNA-binding transcriptional repressor YgbI
Organism
pcoa
Pectobacterium colocasium
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Gene cluster
GFIT
Motif
Pfam:
DeoRC
HTH_DeoR
HTH_11
HTH_24
Fe_dep_repress
GntR
HTH_20
MarR_2
MarR
Rrf2
HTH_23
HTH_AsnC-type
HTH_IclR
HTH_PafC
PaaX
HTH_Mga
DprA_WH
Sigma70_r4
HemN_C
Put_DNA-bind_N
HTH_29
DUF4423
Acyl-CoA-dh_C
HTH_28
TFIIE_alpha
TrmB
AbiEi_4
HTH_36
HTH_Crp_2
DUF746
CggR_N
HTH_5
DDRGK
Mga
Motif
Other DBs
NCBI-ProteinID:
WED69999
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All DBs
Position
complement(2278848..2279606)
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AA seq
252 aa
AA seq
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MIPVERHQQILALIAERGVVSINELTERLGVSHMTVRRDVQKLEQDGLLLSVSGGVRSPE
RLAIEPSHQDKSVMFSQQKAAMGKLAAQHIPLNSCIYLDAGTTTLSLARELAERDDLLIV
TNDFAIAAFLIESSQCRMIHTGGTLCRENRSCVGEAVAQALRNLFIDIAFISASSWSLRG
LSTPNEDKVVVKRAAVEASSKCVLLCDTSKYGRIATHLATPLSVFDSIITDDGLPAAAKE
ALSKMGVEVLVA
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
gtgattccagtagaacgtcatcaacagattctggcgctgatcgccgaacgcggcgtggta
agcatcaatgaattgaccgagcgactgggcgtgtcgcacatgacggtacggcgcgatgtg
caaaagctggagcaggacggcctgctgctgagcgtctccggtggcgtgcgctcgcccgag
cgcctggcgattgagccgtcgcatcaggataaatccgtgatgttcagccagcagaaagcg
gcgatgggtaaactggcggcacagcacattccgttgaatagctgcatttatctggatgca
ggcaccacgacgctatcgctggcgcgcgagctggcggaacgtgacgatctcctgattgtc
accaacgattttgcgattgccgcttttctcattgagtccagccagtgccgcatgatccac
accggcggcacgctgtgtcgggaaaaccgctcctgcgttggggaagccgtggcgcaggcg
ctgcgcaacctgtttatcgacatcgcctttatctccgcctcttcctggagcctgcgcggg
ttgtccacgccgaacgaagacaaagtggttgtgaaacgcgcggcggtagaagccagcagc
aagtgcgtactgctgtgtgacacctcgaaatacggccgcatcgccacccatctcgccacg
ccgctcagcgtattcgacagcatcatcaccgacgacggcctacctgccgccgccaaagaa
gccttgagcaaaatgggggtggaggtgctggtggcgtga
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