Pectobacterium colocasium: PJ912_12455
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Entry
PJ912_12455 CDS
T08961
Name
(GenBank) LacI family DNA-binding transcriptional regulator
KO
K03487
LacI family transcriptional regulator, asc operon repressor
Organism
pcoa
Pectobacterium colocasium
Brite
KEGG Orthology (KO) [BR:
pcoa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcoa03000
]
PJ912_12455
Transcription factors [BR:
pcoa03000
]
Prokaryotic type
Helix-turn-helix
LacI family
PJ912_12455
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
Peripla_BP_6
HTH_31
HTH_3
TetR_N
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
WED70053
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All DBs
Position
2418106..2419119
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AA seq
337 aa
AA seq
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MVTMLDVAKKAGVSKATVSRVLTGNNYVSKTTRDWVFRAIEEIGYRPNLLARQLATSKSQ
IIGLVVTNTLYSGPYFSELLFQTATMTEKYGRQLIMADGKHSAEEEREAIQFLLDLRCDA
VIIYPRFLSIDALESIIEQHEQPIMVVNRTLHRHGDNGICADHQQHCHDAVNYLITQGHR
DIAFICGSPNSPTGTSRLAGYRQALEENGIPYSDSLVAPGDWTHDSGYSATKTLLQQAGT
FSALVASNDDMAIGAAKALREHGLAIPQDVSLLGFDDLPMASWFYPPLTTVHVPVAEMIN
YTLEKLLCRLEGETVVPAPDFKGELIIRDSVSKGPAA
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atggtaaccatgctcgatgtagcgaaaaaagccggtgtctccaaagccaccgtatcacgc
gtgctgacagggaataactacgtcagtaaaaccacgcgggattgggtattccgggcgatt
gaagagattggctaccggcctaacctgctggcgcgccagctcgccacaagcaaatcgcaa
atcattggcttggtcgtgaccaacacgctatacagcggcccctatttcagcgaattgctg
ttccaaacggcgacgatgacggaaaaatacgggcggcagctcatcatggcggatggcaaa
cacagtgcggaagaagagcgagaagcgatccagttcctgctcgatttacgctgcgatgcc
gtcattatctatccgcgctttctttctatcgatgcgctggaaagcattatcgaacagcat
gaacagccgattatggtcgtcaaccgtacactgcatcggcacggtgacaacggtatctgt
gctgaccaccagcaacactgccatgatgccgtcaattacctgattacgcagggtcatcgt
gatattgcgtttatctgcggatcgccgaattcacccaccggcacgagccgactggcgggc
taccggcaagcgctggaggaaaatgggattccctatagtgacagtctggttgcgcctggc
gactggacgcatgacagcggttattcggcaacaaaaaccctgctgcaacaggcgggcact
ttcagtgctctggtcgccagcaatgacgacatggctattggcgcggcaaaagcgctgcgc
gaacacggccttgcaattccgcaggatgtttcgctgttagggttcgatgatttacccatg
gcttcatggttctatcccccgctcactaccgtacacgtgcccgtcgcagagatgatcaac
tatacccttgagaaactgctgtgccggctggagggtgaaaccgtcgtgcctgcgcctgac
ttcaagggcgaattgattatccgcgattccgtcagcaaaggccctgccgcttaa
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