Pectobacterium colocasium: PJ912_13710
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Entry
PJ912_13710 CDS
T08961
Symbol
slmA
Name
(GenBank) nucleoid occlusion factor SlmA
KO
K05501
TetR/AcrR family transcriptional regulator
Organism
pcoa
Pectobacterium colocasium
Brite
KEGG Orthology (KO) [BR:
pcoa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcoa03000
]
PJ912_13710 (slmA)
03036 Chromosome and associated proteins [BR:
pcoa03036
]
PJ912_13710 (slmA)
Transcription factors [BR:
pcoa03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
PJ912_13710 (slmA)
Chromosome and associated proteins [BR:
pcoa03036
]
Prokaryotic type
Chromosome partitioning proteins
Inhibitors of FtsZ assembly
PJ912_13710 (slmA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SlmA-like_C
TetR_N
TetR_C_6
WAPL
GCP_C_terminal
GmrSD_N
DUF6262
HTH_11
Motif
Other DBs
NCBI-ProteinID:
WED67606
LinkDB
All DBs
Position
complement(2673261..2673857)
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AA seq
198 aa
AA seq
DB search
MAEKESTKRNRREEILQALAQMLESSDGSQRITTAKLAANVGVSEAALYRHFPSKTRMFD
SLIEFIEDSLTTRINLILQDEKETFNRLRLILLLILGFAERNPGLTRIMTGHALMFEQDR
LQDRINQLFERIESQLRQVLREHKLRDGKGFQHDETLLASQLLAFCEGMLSRFIRSEFRY
RPTQEFDTRWPLLAAQLN
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaaaagaaagtacgaaaaggaaccgccgcgaggaaattttgcaggcgctggcg
caaatgctggaatccagcgacggcagccaacgcatcaccacggcaaaactggcggcgaac
gtcggcgtgtccgaggcggcgctctaccgacatttccccagtaaaacgcggatgtttgat
agcctgattgaatttattgaggatagcctgaccacccgcattaacctgattctgcaagac
gaaaaagaaacgtttaatcgtcttcgtctgattttgctgctgattttagggtttgcggaa
cgcaatcctggtctgactcgcatcatgaccggccacgcgctgatgtttgaacaggatcgc
ttacaggatcgcatcaaccagctgtttgagcgtattgaatcacagctgcgtcaggtgcta
cgcgagcataagctacgcgatggtaaaggcttccagcatgacgaaacgctgctggctagc
cagctgttagcgttttgcgaagggatgctatcgcgcttcattcgttctgaattccgctat
cgtccaacgcaagaattcgacacccgctggccgctgctggccgcacagttgaactaa
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