Pectobacterium colocasium: PJ912_13740
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Entry
PJ912_13740 CDS
T08961
Symbol
mutM
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
pcoa
Pectobacterium colocasium
Pathway
pcoa03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pcoa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PJ912_13740 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcoa03400
]
PJ912_13740 (mutM)
Enzymes [BR:
pcoa01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
PJ912_13740 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
PJ912_13740 (mutM)
DNA repair and recombination proteins [BR:
pcoa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PJ912_13740 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Zn_ribbon_6
zf-dskA_traR
Motif
Other DBs
NCBI-ProteinID:
WED67610
LinkDB
All DBs
Position
2676459..2677268
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AA seq
269 aa
AA seq
DB search
MPELPEVETSRRGISPYLVDHTILYAEVRNSRLRWPVSAEILSLSDEPVLSVRRRAKYLL
IELTRGWIIVHLGMSGSLRVLPEYSEPEKHDHVDLVMDSGKVLRYTDPRRFGAWLWTDNP
ETCSVLAHLGPEPLEAEFSADYLYQASRGKKTAIKQWIMDNKVVVGVGNIYASESLFAAG
IHPDRAAGSLNENDAAVLVGVIKQVLQLSIEQGGTTLRDFLQSDGKPGYFAQELRVYGRN
GEPCRTCGTPIETAKHGQRSTFFCRRCQR
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaattacctgaggttgaaaccagtcgtcgggggatttcaccgtatctcgtcgat
cacaccattctgtatgctgaggtgaggaactcacgcctgcgctggccggtatcggctgag
attctctcgctgagcgatgagccggtgctcagtgtgcgtcggcgggcaaaatacctgctg
attgagctcacccgcggctggattattgtgcatcttggcatgtctggtagcctgcgggtg
ttgccggaatatagcgagccagagaaacacgatcatgttgatttggtgatggacagcggt
aaggtgctgcgttacaccgatccccggcgctttggtgcgtggctgtggacagataatcca
gaaacctgctcggtcttggcgcatttggggccggagccgttagaggcagagttctctgca
gattatctctatcaggcctcacgcggtaaaaagacggcaatcaaacagtggattatggat
aacaaagtggtcgttggcgtaggcaatatctacgcgagtgaatcgctgtttgctgctggc
atccaccctgacagagcggccggctcgttaaatgaaaacgacgcagccgtattggttggc
gtgattaaacaggtgctacagctttcgattgagcagggcggtacgacgctgcgcgacttt
ttgcaatcagacggtaaacccggctatttcgcgcaggaactgcgagtctatggccgcaat
ggtgaaccttgccggacatgtggaacaccgatcgaaaccgcgaaacatggtcagcgcagt
acctttttctgccgccgctgccagcgttaa
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