Pectobacterium colocasium: PJ912_18390
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Entry
PJ912_18390 CDS
T08961
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K13888
membrane fusion protein, macrolide-specific efflux system
Organism
pcoa
Pectobacterium colocasium
Brite
KEGG Orthology (KO) [BR:
pcoa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcoa02000
]
PJ912_18390
Transporters [BR:
pcoa02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
PJ912_18390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_3
HlyD_D23
Biotin_lipoyl_2
Biotin_lipoyl
HlyD_2
THOC7
E2R135
CusB_dom_1
DUF4131
RnfC_N
JIP_LZII
Motif
Other DBs
NCBI-ProteinID:
WED68101
LinkDB
All DBs
Position
complement(3522448..3523647)
Genome browser
AA seq
399 aa
AA seq
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MQSRFFTRRRTTIALGIIAAAVLIHLFFNKPAPTPNAQTTAAEIADLEQTVLADGKIEAQ
KQVSVGAQASGQIKALHVELGDKVTKGQLIAEIDDLTQQDTLRNGEAALKNIQAQRTAKL
AELRNNELSWQRQQMLMKRGVGAQADYDSAKATLDATRANIDALDAQIVQAQITVNTAKV
NLGYTQIRSPMDGTVVAIPVEAGQTVNAIQTTPTIAKVANLDTMTIKVKISEADVVKVKT
GMPVWFSILGEPNKRYEATLSSIEPAPDSINTDSTTTSSSSSSSTSSSSSTAIYYNGLFD
VKNPDGVLRISMTAQVYILLSSVKNAIVVPATALTSRNGMWYVQVMNANKKIESRLVTLG
LNDNVRTQIRSGLSVGEQVVVSPSSGDVASTHPGPPMGM
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgcaatcacgattttttacacgacgccgtacgacgatagcgcttggcattatcgccgct
gccgtgcttattcacttgtttttcaacaagcccgcgcctacgccaaacgcgcagaccacc
gccgcagaaattgcggatcttgaacagacggtacttgctgacggcaaaattgaagcgcag
aagcaggtcagcgtcggtgctcaagcctcgggacaaatcaaagcgctgcacgtcgaactc
ggcgataaggtcacaaaagggcaattgatcgccgagattgatgacctcacccaacaggac
acgttaagaaatggcgaagcggcgctaaaaaacattcaggctcagcgaaccgccaaactg
gcggaattgcgtaacaacgaattgagctggcagcgccagcaaatgttgatgaaacgcggc
gttggcgctcaggccgactacgatagcgcgaaagccacgctcgatgccacccgagccaat
attgacgcgctggacgcccagatcgttcaggcacagattaccgtcaacaccgccaaggtt
aacctcggatatacccagattcgttcaccgatggacggcaccgtggtggcgattccggtt
gaagcgggccaaacggtcaacgccatccagaccacgccgaccattgccaaagtcgccaat
ctggacaccatgaccatcaaggtgaagatttcagaagccgacgtcgtcaaggtgaaaacc
ggcatgcctgtgtggttcagtattctgggcgaaccgaataagcgttacgaagccacgctg
agctcgattgaacccgcgccggattccatcaatacggattcaactacgacgtcatccagt
tccagcagcagcaccagttcatcatccagcaccgcgatctattacaacggcctgtttgat
gtgaagaaccctgacggcgtattgcgcatttccatgacggcacaggtgtatatcctgctg
tcgtcggtgaaaaatgccattgtcgtcccagcgacggcattaacctcgcgtaatggcatg
tggtacgtgcaggtcatgaatgcgaacaagaagatcgaatcgcggctggtcacgctcggc
ctcaatgataacgtgcgcacccagatccgttcagggctcagcgtgggggagcaggtggtt
gtcagcccgtcgtccggtgatgtcgcgtccacgcatcccggcccaccgatggggatgtaa
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