Pectobacterium colocasium: PJ912_18390
Help
Entry
PJ912_18390 CDS
T08961
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K13888
membrane fusion protein, macrolide-specific efflux system
Organism
pcoa
Pectobacterium colocasium
Brite
KEGG Orthology (KO) [BR:
pcoa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcoa02000
]
PJ912_18390
Transporters [BR:
pcoa02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
PJ912_18390
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BSH_RND
RND-MFP_C
Beta-barrel_RND
BSH_CzcB
HH_MFP_RND
Biotin_lipoyl
BSH_YknX
BSH_CusB
YknX_C
BSH_YhbJ
CzcB_C
Beta-barrel_YknX
THOC7
E2R135
TP096X_C
HH_CzcB
CSNKA2IP
DUF4131
RnfC_N
JIP_LZII
Motif
Other DBs
NCBI-ProteinID:
WED68101
LinkDB
All DBs
Position
complement(3522448..3523647)
Genome browser
AA seq
399 aa
AA seq
DB search
MQSRFFTRRRTTIALGIIAAAVLIHLFFNKPAPTPNAQTTAAEIADLEQTVLADGKIEAQ
KQVSVGAQASGQIKALHVELGDKVTKGQLIAEIDDLTQQDTLRNGEAALKNIQAQRTAKL
AELRNNELSWQRQQMLMKRGVGAQADYDSAKATLDATRANIDALDAQIVQAQITVNTAKV
NLGYTQIRSPMDGTVVAIPVEAGQTVNAIQTTPTIAKVANLDTMTIKVKISEADVVKVKT
GMPVWFSILGEPNKRYEATLSSIEPAPDSINTDSTTTSSSSSSSTSSSSSTAIYYNGLFD
VKNPDGVLRISMTAQVYILLSSVKNAIVVPATALTSRNGMWYVQVMNANKKIESRLVTLG
LNDNVRTQIRSGLSVGEQVVVSPSSGDVASTHPGPPMGM
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgcaatcacgattttttacacgacgccgtacgacgatagcgcttggcattatcgccgct
gccgtgcttattcacttgtttttcaacaagcccgcgcctacgccaaacgcgcagaccacc
gccgcagaaattgcggatcttgaacagacggtacttgctgacggcaaaattgaagcgcag
aagcaggtcagcgtcggtgctcaagcctcgggacaaatcaaagcgctgcacgtcgaactc
ggcgataaggtcacaaaagggcaattgatcgccgagattgatgacctcacccaacaggac
acgttaagaaatggcgaagcggcgctaaaaaacattcaggctcagcgaaccgccaaactg
gcggaattgcgtaacaacgaattgagctggcagcgccagcaaatgttgatgaaacgcggc
gttggcgctcaggccgactacgatagcgcgaaagccacgctcgatgccacccgagccaat
attgacgcgctggacgcccagatcgttcaggcacagattaccgtcaacaccgccaaggtt
aacctcggatatacccagattcgttcaccgatggacggcaccgtggtggcgattccggtt
gaagcgggccaaacggtcaacgccatccagaccacgccgaccattgccaaagtcgccaat
ctggacaccatgaccatcaaggtgaagatttcagaagccgacgtcgtcaaggtgaaaacc
ggcatgcctgtgtggttcagtattctgggcgaaccgaataagcgttacgaagccacgctg
agctcgattgaacccgcgccggattccatcaatacggattcaactacgacgtcatccagt
tccagcagcagcaccagttcatcatccagcaccgcgatctattacaacggcctgtttgat
gtgaagaaccctgacggcgtattgcgcatttccatgacggcacaggtgtatatcctgctg
tcgtcggtgaaaaatgccattgtcgtcccagcgacggcattaacctcgcgtaatggcatg
tggtacgtgcaggtcatgaatgcgaacaagaagatcgaatcgcggctggtcacgctcggc
ctcaatgataacgtgcgcacccagatccgttcagggctcagcgtgggggagcaggtggtt
gtcagcccgtcgtccggtgatgtcgcgtccacgcatcccggcccaccgatggggatgtaa
DBGET
integrated database retrieval system
