Pectobacterium colocasium: PJ912_18495
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Entry
PJ912_18495 CDS
T08961
Name
(GenBank) DNA-3-methyladenine glycosylase family protein
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
pcoa
Pectobacterium colocasium
Pathway
pcoa03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pcoa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PJ912_18495
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcoa03400
]
PJ912_18495
Enzymes [BR:
pcoa01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
PJ912_18495
DNA repair and recombination proteins [BR:
pcoa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PJ912_18495
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
WED68108
LinkDB
All DBs
Position
complement(3545849..3546511)
Genome browser
AA seq
220 aa
AA seq
DB search
MPSHPPLDFTQQAKTHLSAINARWASLIEQVGDCRHQTAPHREPYEALMRAVAYQQLTTR
AGDAMVAKLLRVHDDAFPSPEQMLACSTDTLRQCGFSARKADTLHGIAQGALSGLVPSLE
QAAERDDDTLIQQLTSLKGIGRWTVEMFLIYSLERTDIMPLDDLGIRQGLRYVYDLQDMP
KPRDLQALSLHCQPYRTVASWYLWRSLELPAYQHFKLTHR
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atgccatcccatccgccgttggatttcacgcagcaggccaaaacccatctcagcgccatc
aatgcgcgctgggccagcctgatcgaacaggttggcgattgtcgccatcagaccgcgcca
caccgtgaaccctatgaggcgctgatgcgtgccgttgcctatcagcaactgacgacgcgt
gccggggacgcgatggtcgcgaagctcctgcgggtccatgacgatgcctttcccagcccg
gaacagatgctggcctgctccacagatacgctgcggcagtgcggtttttctgcccgcaaa
gcggatacgctacacggtatcgcgcagggagcgctgagcggtttggtgcctagcctcgaa
caggccgcagagagggatgatgacacgctcattcagcagttgacgtcgctcaaggggatc
gggcgctggacggtagaaatgtttttgatttattcgctcgaacgcaccgatatcatgccg
ctcgacgatctcggtattcgtcaggggttgcgctacgtttacgatttgcaggatatgccg
aaaccgcgcgatttgcaggcactgagcctgcactgtcagccttatcgcacggtggcgtca
tggtatttatggcgatcgctggagctaccggcgtatcagcactttaaactgacacaccgg
taa
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