Pectobacterium colocasium: PJ912_22230
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Entry
PJ912_22230 CDS
T08961
Name
(GenBank) ABC transporter ATP-binding protein
KO
K14699
ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
Organism
pcoa
Pectobacterium colocasium
Pathway
pcoa02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pcoa00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
PJ912_22230
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcoa02000
]
PJ912_22230
Transporters [BR:
pcoa02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
PJ912_22230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
AAA_16
AAA_22
AAA_21
nSTAND3
AAA_29
AAA_25
ABC_ATPase
AAA_23
AAA_30
DUF6879
AAA_18
AAA_33
Zeta_toxin
DEAD
AAA
RsgA_GTPase
AAA_19
Motif
Other DBs
NCBI-ProteinID:
WED70275
LinkDB
All DBs
Position
4304566..4306356
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AA seq
596 aa
AA seq
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MNKNHTVITTRLFAWWHTYRQLERVTGSQARLFRRCCLSLLAAAMMQGLALACLFPLLSA
FTHAAAAREIAIWLTVMTILSLLTLVLRWYGQGFEYRGQLAAATHELRMRLGEQLRSMPL
TTLQSARAGDINALLLGSVDENLNYMLAIVNQLLLAIVTPVVIALVMLVVEWQLGLSLLL
LFPVIALLYRWRRPAFAHTMQALAEANQQTSADIVEYVQGLAVLRTSCQQAERTSALRQR
FQHLQQVQTSAHRRGAKPGAMVTSVVELGLQGVLILGISGVVVGAWEVAIVAAMMVITVR
FSEPLATFVSYTAVLALIETALHRIDDLLAIEPLPVCSPMAVPTTYAITFEQVGFRYVDE
VEPVLDGVNIILPEKGMTALVGPSGSGKTTITRLLMRHADPQRGRVCIGGVDIRHIPTRE
LNRLISVVFQDVYLFDDSVLANIRMARPEASDAEVERAAEAAQCLALIQRLPQGWQTRLG
DIGGRLSGGERQRISIARALLKDAPIVILDEPTAALDTESELAVQRAIDRLVQDKTVIVI
AHRLSTIVGAHRILVVEKGVISQQGTHSELLRAEGRYRALWNAQQKGSHLSHNAHI
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaaaaccataccgtcataacaacgcggttatttgcatggtggcacacgtaccgt
caactggagcgagtgacggggtcgcaagcccgcctgttccgtcgatgctgcctgagcctg
ctggcggcagcgatgatgcaggggctggcgctggcgtgcctgtttccgctgctgtcggcg
ttcacccatgcggctgctgcccgtgagatcgcgatatggctgacagtcatgacaattcta
agcctgctgacgctggtactgcgctggtatggtcaagggtttgaataccgtgggcagctt
gcggcggcgacccatgaactgcgtatgcgtctgggagaacagctgcggagtatgccgttg
accacgcttcaatccgcgcgggcgggggatattaacgcactgctgttgggcagtgtggat
gagaacctgaactatatgttggcgatagtaaaccaactgctactggctatcgtgacgccc
gtcgtgatagcgctcgtcatgctggtggtcgagtggcagttaggcctaagcttgctactg
ctttttcccgtcatcgcgctgctgtatcgctggaggcgacctgcatttgcgcacacgatg
caggcgctagcggaggctaaccagcaaaccagcgccgatattgtggaatatgtgcagggg
cttgccgtcctgagaaccagctgtcagcaggctgagcgcacatcagcgctgcgtcagcgt
tttcagcatctacagcaggtacaaacgtcggctcatcgtcgcggagccaaacccggcgcg
atggtcaccagcgttgtggagttgggccttcagggcgtactgattctgggtatcagcggc
gttgtcgtgggggcgtgggaggtggccatcgtcgctgcgatgatggtgattaccgtgcgc
ttttctgaaccgctggcgacgtttgtcagctatacggccgtgctggcgctcattgagacg
gcgctgcatcgcattgacgatctgctggccattgaaccgctgcccgtgtgttcgccgatg
gcggtgccgacgacatatgcgattacattcgagcaggttggtttccgctatgtggatgag
gttgaaccggtgcttgatggggtgaacatcatactgccggagaaggggatgacggcgctg
gttgggccgtctggctcggggaaaacgacgataacgcgactgctgatgcgtcatgcggat
ccgcaacgcgggcgcgtgtgtatcggcggcgtggatattcgccacattcctacgcgtgaa
ttaaatcggctgatttccgtggtgtttcaggatgtctatctgtttgatgattcggtgctg
gcaaacattcgcatggcgcgcccggaggccagcgacgcagaggttgaacgggctgcggaa
gctgcccagtgtctggcgttgattcaacggctgccgcagggatggcaaacgcggctgggt
gatatcggtggccgattatccggcggtgaacggcagcgtatttcaattgcgcgggcatta
ttgaaggatgcgccgatagtgattctggacgaaccgacagcggcgttggataccgaaagc
gaactagccgtacagcgggcgattgacaggctggtgcaggacaagacggttatcgtcatt
gcccatcggctatcgacgattgtgggggcacatcgaattctggttgtggagaagggcgtt
atttcccagcagggaacgcacagcgaattactgcgtgctgaagggcgttatcgcgcattg
tggaatgcgcaacagaaaggttcgcacctctcccataatgcccatatttaa
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