Pectobacterium colocasium: PJ912_23815
Help
Entry
PJ912_23815 CDS
T08961
Symbol
cydC
Name
(GenBank) heme ABC transporter ATP-binding protein/permease CydC
KO
K16012
ATP-binding cassette, subfamily C, bacterial CydC
Organism
pcoa
Pectobacterium colocasium
Pathway
pcoa02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pcoa00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
PJ912_23815 (cydC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcoa02000
]
PJ912_23815 (cydC)
Transporters [BR:
pcoa02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
PJ912_23815 (cydC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
AAA_21
SMC_N
AAA_16
DUF4293
NACHT
DUF87
AAA_18
AAA_22
AAA_5
MMR_HSR1
RsgA_GTPase
Rad17
AAA_25
AAA_29
AAA_30
FtsK_SpoIIIE
SbcC_Walker_B
Motif
Other DBs
NCBI-ProteinID:
WED68617
LinkDB
All DBs
Position
complement(4591395..4593134)
Genome browser
AA seq
579 aa
AA seq
DB search
MAQRKTMQVLKPFLALYRQHIWRLSLGIVLAIATLLASIGLLALSGWFLAGAALAGIVGL
LTFNYMLPAAGVRGAAIARTAGRYFERLVSHDATFRVLLRLRVFTFSRILPLSPGGLAQF
RQAELLNRLVADVDTLDHLYLRVISPIVSAFAVILIVCYGLSFIDASLALTLGAIMLVLL
LCLPVLFYRAGNGIGQDLTALRAQYRLQLTTWLQGQAELTVFGALDRVRQQLALVEINWL
RRQRQQANLTGLSQAVMILCSGLTVTLILWLAADGVGGNPQPGALIALFVFASLAAFEAL
APVTVAFQHMGQVIASAARVDQIIRQPVDVTFPEHGPETSREASLDLSHVGFTYPGQPQP
VLQNISLSIKSGEHLALLGRTGCGKSTLLQLLTRAWNCEYGDITLNGHPLADWREDDLRT
MMSVVPQRVHIFSATLRDNLLLAAPTARDEKLAEVLQQVGLEKLLENEGLNAWLGEGGRQ
LSGGEQRRIALARALLHDAPLVLLDEPTEGLDAETEKRILQLLRQHCADKTLIVITHRLY
GLESMDRICILDDGKVIEQGSHQALMAEKGRYWQFRQHV
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atggctcagagaaaaacgatgcaggtattaaaaccgtttctggcactctaccgccaacac
atctggcgcttaagtttgggcattgtgctggctattgctacgctgcttgccagcattggc
ctgcttgccctatccggctggtttctggcgggggccgcattggcaggaatcgtcgggcta
cttaccttcaactatatgttgcctgccgcaggtgtacggggtgcggcgattgcacgcacg
gctgggcgctatttcgaaaggctcgtcagccacgatgccaccttccgcgttctgctgcgc
ttacgtgttttcaccttttctcgcattctgccgctctccccgggtgggctggcgcaattt
cgtcaggctgagctactaaatcggctggtggcggacgtggatacgctcgaccacctctat
cttcgcgtgatttcccctatcgtcagcgcattcgccgtcattcttatcgtctgttacggt
ctaagctttattgacgcctcattggcgttaacgcttggtgccatcatgctggtgctgttg
ttatgtctgccggttctgttttatcgggcaggaaacggtatcgggcaggatttgaccgcg
ctgcgggcacaataccgcctccaattaacgacctggctacaaggtcaggcggagctcact
gtcttcggcgcactcgatcgcgtccgccagcagttggcgctggtggaaattaactggcta
cgtcgtcaacgccagcaagccaatcttaccggcctgtctcaggcggtcatgattctgtgc
agcgggctgaccgttaccctgattctgtggctggcggcggatggggttggcggtaatcca
cagcccggcgcgttgattgcactgttcgtgtttgcctcgcttgctgccttcgaggcgttg
gctcccgtcacggtggcgtttcagcatatggggcaagtaattgcctccgctgctcgggtc
gatcaaatcattcgtcagcccgttgacgtcacgtttcctgagcatggcccagaaacgtca
cgcgaggcctcactcgacctctcacatgtggggttcacttaccccggtcagccacagccc
gtgctgcaaaacatttctctttccattaaatcaggcgaacatctggcgctgctggggcgt
acgggatgcgggaaatcgacgctcttgcaattgctgactcgggcatggaattgtgaatac
ggggatattacgttgaatggtcatcccctcgctgactggcgggaagacgatctccgcacc
atgatgagcgtggtaccacagcgcgtgcatattttcagcgcaacgctgcgtgataaccta
ttgttggccgcaccgacagctcgggacgaaaaactggccgaggtattgcagcaggtcggg
ttagaaaaattgctggaaaatgaaggactgaatgcctggttaggagaaggcggtcgccaa
ctctccggcggtgagcagcgccgtatcgctttagcacgagcattgctacacgacgcaccg
ctcgttctgttggatgaacccactgaagggttggatgcagagactgaaaaacgtattctg
caactgctacgccagcactgtgctgataagacgctcatcgtcatcactcaccggttatac
ggtttagaatcaatggatcgcatctgtattctggacgacggcaaagtgatcgaacagggt
agccatcaggcgctaatggcagaaaaaggtcgttattggcaattccgccaacacgtttaa
DBGET
integrated database retrieval system
