Pectobacterium colocasium: PJ912_23850
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Entry
PJ912_23850 CDS
T08961
Symbol
serS
Name
(GenBank) serine--tRNA ligase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
pcoa
Pectobacterium colocasium
Pathway
pcoa00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pcoa00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
PJ912_23850 (serS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pcoa01007
]
PJ912_23850 (serS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pcoa03016
]
PJ912_23850 (serS)
Enzymes [BR:
pcoa01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
PJ912_23850 (serS)
Amino acid related enzymes [BR:
pcoa01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
PJ912_23850 (serS)
Transfer RNA biogenesis [BR:
pcoa03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
PJ912_23850 (serS)
Prokaryotic type
PJ912_23850 (serS)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
Par-4_C
FAR1_C
Phage_scaffold
USP8_interact
LEKR1
Sos7
Troponin
Motif
Other DBs
NCBI-ProteinID:
WED68620
LinkDB
All DBs
Position
4603065..4604360
Genome browser
AA seq
431 aa
AA seq
DB search
MLDPNLLRNELDAVAEKLLARRGFKLDVETLRKQEERRKVLQVETENLQAERNSRSKEIG
AAKARGEDIEPLRREVNTLGEKLDAAKAELDQLQNEIRDLALTIPNLPDDSVPLGKDDTE
NQEVARWGEPRKYDFPVRDHVELGEMAAGLDFAAAVKLTGARFVVMKGQIARLHRALAQF
MLDLHTQQHGYQEAYVPYLVNHATLYGTGQLPKFGEDLFHTRPLSEEAESSNYALIPTAE
VPLTNLVRDEILDEESLPLKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVELVQIVRPE
DSMQALEELTTHAETVLQLLKLPYRKVLLCTGDMGFGSTKTYDLEVWLPAQDTYREISSC
SNMWDFQARRMQARCRSKSDKKTRLVHTLNGSGLAVGRTLVAVLENYQQADGRIEIPEVL
RPYMGGLEFIG
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgctcgatcccaatttactgcgtaatgagctagacgcagtcgccgaaaagttactggct
cgcagaggctttaagctggatgttgagaccctgcgtaagcaggaagaacgtcgtaaagta
ttgcaggtagaaactgaaaacctgcaggcagagcgtaactcccgatcgaaagagattggt
gcagcgaaagcacgcggtgaagatatcgagcctttgcgtcgtgaagttaacacattaggc
gaaaaactggatgccgcgaaagccgagctggatcagttgcagaatgaaattcgcgatctg
gcgttaaccattccaaacctgccggacgactccgtaccgcttggtaaggatgatacagag
aaccaggaagtggctcgctggggtgagccgcgcaaatatgatttccctgtgcgcgatcat
gttgaactcggcgagatggctgccggactggattttgccgctgcggtgaaattaacgggt
gcgcgttttgtcgtgatgaaaggacaaattgcccgtctgcatcgtgcgcttgcccagttc
atgctggatttgcatacgcaacagcatggctatcaggaagcctatgtgccttatctggtt
aaccacgccacgttatacggaactggtcagttgcctaaatttggtgaagatctgttccat
acccgaccgttgagtgaagaagcggaaagcagcaactatgcgctgattccgacggcggaa
gttccgttgaccaatctggtgcgtgacgagattcttgatgaagaatccttgccgttgaag
atgaccgctcacacgccttgcttccgttctgaagcgggttcgtatggtcgcgatacgcgt
gggttgattcgtatgcaccagtttgacaaggttgaactggtacaaatcgtccgccctgaa
gattctatgcaggcgctggaagaattgacgacccacgccgaaacggtactgcaactgctg
aaattaccgtatcgtaaagtcttgctgtgcacaggcgatatgggctttggctccaccaaa
acttacgatctggaagtctggctgccggcgcaagatacgtaccgtgaaatctcctcttgc
tcaaacatgtgggatttccaggcgcgtcgtatgcaggctcgctgccgtagcaagtccgac
aagaagacccgtctggttcacacgttgaacggttctggtctggcagttggtcgtacactg
gtagctgttctggaaaactaccagcaggccgatggccgtattgaaattcctgaagtgctg
cgtccatatatgggcgggctggagtttattggttaa
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