Pectobacterium colocasium: PJ912_24140
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Entry
PJ912_24140 CDS
T08961
Symbol
kdsB
Name
(GenBank) 3-deoxy-manno-octulosonate cytidylyltransferase
KO
K00979
3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:
2.7.7.38
]
Organism
pcoa
Pectobacterium colocasium
Pathway
pcoa00541
Biosynthesis of various nucleotide sugars
pcoa01100
Metabolic pathways
pcoa01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
pcoa00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
PJ912_24140 (kdsB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
pcoa01005
]
PJ912_24140 (kdsB)
Enzymes [BR:
pcoa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.38 3-deoxy-manno-octulosonate cytidylyltransferase
PJ912_24140 (kdsB)
Lipopolysaccharide biosynthesis proteins [BR:
pcoa01005
]
Lipid A
PJ912_24140 (kdsB)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
CTP_transf_3
NTP_transf_3
DUF2064
DUF2683
Motif
Other DBs
NCBI-ProteinID:
WED68644
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All DBs
Position
4664560..4665312
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AA seq
250 aa
AA seq
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MTFTVIIPARFASSRLPGKPLADINGKPMVVHVMERALESGAQRVIVATDHPDVETAVRQ
AGGEVCLTRTDHNSGTERLAEVIERYGFTDDDIIVNVQGDEPLIPSVIIRQVAENLAASK
AGMATLAVPIETSEEAFNPNAVKVVTDAEGYALYFSRATIPWDRERFAQSKETIGDHFLR
HIGIYAYRAGFVRRYVSWAPSQLEQIELLEQLRVLWYGEKIHVAVAKAVPSVGVDTPEDL
ARVRHVMANQ
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atgacctttaccgtaatcattcctgcgcgttttgcgtcaagccgactgcccggtaagccg
ctggcggacatcaatggcaaaccaatggtcgtccatgtgatggaacgggcgttggaatcg
ggtgcgcagcgcgttattgtcgctaccgaccatcctgatgttgaaacggctgtgcggcaa
gcgggcggtgaagtgtgcctgacccgcaccgatcataattccggcacggagcgtctggct
gaagtcattgagcgctacggttttaccgacgatgacatcatcgttaatgttcagggcgat
gaaccactcattccttccgtgatcattcgtcaggtggcagaaaacctcgcagccagtaaa
gcgggaatggcaacgctggcggtgccgattgaaaccagcgaagaagcattcaacccgaat
gcagtaaaagtggttaccgacgccgagggatacgcgctgtatttttcccgtgcgacgatt
ccttgggacagagagcgttttgctcagtcgaaagaaaccattggcgatcatttcctgcgt
catatcggcatttatgcctaccgtgcggggtttgtgcgccgttatgtcagttgggccccg
agccaactggagcaaatcgaattactggagcaactgcgcgtgctgtggtacggcgagaag
attcacgttgcggttgcgaaagcggtgcctagcgtcggcgtggatacgccagaagatctg
gcccgtgtgcggcacgtcatggcgaatcagtaa
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