Pectobacterium colocasium: PJ912_24515
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Entry
PJ912_24515 CDS
T08961
Name
(GenBank) MurR/RpiR family transcriptional regulator
KO
K19337
RpiR family transcriptional regulator, carbohydrate utilization regulator
Organism
pcoa
Pectobacterium colocasium
Brite
KEGG Orthology (KO) [BR:
pcoa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcoa03000
]
PJ912_24515
Transcription factors [BR:
pcoa03000
]
Prokaryotic type
Helix-turn-helix
Other families
PJ912_24515
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HTH_6
SIS
SIS_2
MarR
HTH_24
HTH_Tnp_ISL3
Penicillinase_R
HTH_29
Nuc_deoxyri_tr2
HTH_Crp_2
TrmB
RWP-RK
Motif
Other DBs
NCBI-ProteinID:
WED68681
LinkDB
All DBs
Position
complement(4741337..4742206)
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AA seq
289 aa
AA seq
DB search
MNMLEKIQSHLELLSKSERKVAEVILSTPQTAIHSSIATLAKMADVSEPTVNRFCRRLET
KGFPDFKLHLAQSLANGTPYVNRNVEEDDSVDAYTSKIFESAMAGLEQVKSSLDVTAVNR
AVDLLTQAKKISFFGLGASAAVAHDAMNKFFRFNIPVVYFDDIVMQRMSCMNSSDGDVVV
LISHTGRTKSLVEMAQLARENDATVIAITSDGTPLAREASLALRLDVPEDTDVYMPMVSR
IAQLTLIDVLATGFTLRRGEKFRDNLKRVKEALRESRFDKDERLINPFR
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgaatatgctggaaaaaatccagagtcacctagaactcttgagcaaatcggaaagaaaa
gttgctgaagtgatcctgagcactccgcagacagccattcactccagcatcgcgacctta
gccaaaatggccgacgtcagcgagccaacggtcaatcgtttctgtcgtcgccttgaaacg
aaaggatttcccgattttaaactacatctggcacaaagtctggcaaacggtacaccctat
gtgaaccgtaacgttgaagaagatgacagcgttgacgcttacaccagtaaaatctttgaa
tccgcaatggctggcctggaacaggtgaaatccagcctggatgtcaccgccgtcaaccgc
gcagtggatttgctgacgcaggcaaaaaaaatctctttcttcggcctcggcgcttccgct
gctgtcgcacacgatgcgatgaacaaatttttccgctttaatatccccgtcgtttatttc
gatgacatcgttatgcagcgcatgagctgcatgaattccagcgacggcgacgtcgtggtc
ttgatctcccacacgggcagaaccaaaagtctggttgaaatggcgcagctggcgcgcgag
aacgacgcgaccgttatcgcgatcacctcagacggtacgccgctggcacgggaagcctca
ctggcattgcggcttgatgtgcctgaagataccgatgtctatatgccgatggtgtcccgc
atcgcccagttgacgctgatcgacgttctggcaacaggcttcacactgcgccgtggggaa
aagtttcgtgataatctgaagcgggtcaaagaggccctgcgtgaatctcgctttgataaa
gacgagcgattgattaatccctttaggtga
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