Pectobacterium colocasium: PJ912_25315
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Entry
PJ912_25315 CDS
T08961
Symbol
oppB
Name
(GenBank) oligopeptide ABC transporter permease OppB
KO
K15581
oligopeptide transport system permease protein
Organism
pcoa
Pectobacterium colocasium
Pathway
pcoa01501
beta-Lactam resistance
pcoa02010
ABC transporters
pcoa02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pcoa00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
PJ912_25315 (oppB)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PJ912_25315 (oppB)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
PJ912_25315 (oppB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcoa02000
]
PJ912_25315 (oppB)
Transporters [BR:
pcoa02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Oligopeptide transporter
PJ912_25315 (oppB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
BPD_transp_1_N
DUF4839
Motif
Other DBs
NCBI-ProteinID:
WED68730
LinkDB
All DBs
Position
4904229..4905149
Genome browser
AA seq
306 aa
AA seq
DB search
MLKFILRRCLEAIPTLFILITISFFMMRLAPGSPFTGERNLPPEVMANIEAKYHLNDPMM
TQYGNYLLQLVQGDFGPSFKYKDYSVNDLVATSFPVSAKLGAAAFILAIVFGVSAGVIAA
LNQNTKWDYTVMGFAMTGVVIPSFVVAPLLVLIFAITLRWLPGGGWNGGAPKYMILPMVA
LSLSYIASIARITRGSMIEVLHSNFIRTARAKGLPMRRIVLRHALKPALLPVLSYMGPAF
VGIITGSMVIETIFGLPGIGQLFVNGALNRDYSLVLSLTILVGGLTILFNAIIDVLYAVI
DPKIRY
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgttaaaatttattcttcgccgctgtttggaggcgattccgacactattcatcctgatc
accatttcgtttttcatgatgcgactggctcccggcagcccttttaccggtgagcgtaat
ttgccgccggaagtgatggcgaatatcgaagccaaatatcatctgaacgacccaatgatg
acgcagtacggtaattatctactgcaactggtgcagggcgatttcggtccttcttttaaa
tacaaagactattccgtgaacgatttggttgcgacgtctttccccgtttctgcaaaattg
ggggccgcagcattcattctggcgattgtttttggtgtgagtgcaggcgtgatcgctgcg
ctgaatcagaatacgaaatgggattataccgtgatgggctttgccatgacgggggtggtg
attcccagctttgtcgtcgcgccgttgctggtgctgattttcgccattacgctgcgttgg
ttacccggcgggggctggaacggtggggcgcccaaatacatgattttaccgatggtggcg
ctgtctttgtcttatatcgccagcattgcgcgtatcacccgagggtcgatgatcgaggtt
ttacactctaacttcatccgcaccgcgcgcgccaaagggttaccgatgcgtcgcatcgtc
ctgcgacatgcgctgaagcctgcgctgctgcctgtgctctcctatatgggaccggcgttt
gtgggcattattaccggttcaatggttattgaaaccatttttggcttacccggtattgga
caactgttcgtaaacggcgcactgaaccgcgactattcactggtactgagcctgacgatt
ctggtcggcggcttaaccattctctttaatgcgatcattgacgtgctctacgctgttatc
gatccgaaaattcgctattaa
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