Pseudophryne corroboree (corroboree frog): 134889057
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Entry
134889057 CDS
T11513
Symbol
THOC5
Name
(RefSeq) THO complex subunit 5 homolog isoform X1
KO
K13174
THO complex subunit 5
Organism
pcob Pseudophryne corroboree (corroboree frog)
Pathway
pcob03013
Nucleocytoplasmic transport
pcob03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pcob00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
134889057 (THOC5)
09122 Translation
03013 Nucleocytoplasmic transport
134889057 (THOC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcob03019
]
134889057 (THOC5)
03041 Spliceosome [BR:
pcob03041
]
134889057 (THOC5)
Messenger RNA biogenesis [BR:
pcob03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
134889057 (THOC5)
Spliceosome [BR:
pcob03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
134889057 (THOC5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FmiP_Thoc5
Motif
Other DBs
NCBI-GeneID:
134889057
NCBI-ProteinID:
XP_063769416
LinkDB
All DBs
Position
1:complement(418015582..418185945)
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AA seq
689 aa
AA seq
DB search
MSSDSKKRKPKVIRSEEGKRSRHEEQEGRYYSEEAEVDLRDPKKDYDLYKETCEDLQKLM
AEIQDLKSKGSKDAAAEIEEKKIQSCVHFMTLKKLNRLAHIRLKKARDQTHEAKQKVDAY
HLQLQNLLYEVMHLQKEITKCLEFKSKHEEINLVSVEEFYREAPPEISKADITSSDPHQQ
TLARLDWELEQRKRLAEKYKESLASKEKILKEIEVKKEYLSSLQPQLHSIMQASLPVQEY
LSMPFDCMHKQYEIARHLPAPLYVLFVQASAYSQACAHMKSYSQSYRQDKKLVVTIEGSV
EEAKALFKPPEDSQDDESDSDAEEEQTTKRRRPTLGVQLDDKRKEMLKRHPMCVSLIIKC
KDCSSLYLTFYFLMNLNILTVKAKVTPASELVNAISAGDLLNPDSVLRCLYTGDDGKRTP
NPANRYQFDKVGILDLSDYISDVGHPYLWVQAMGGLHFPTDQPQLAVIADNALSASHMEK
TIKLLRSRLLSRLSLHKQFASLEHGIIPISGDCQNLVPAKVVSRLSRWSMMTYEDYLVLP
YTKNVVEGGLAQETDHYYSLMIERGTAKLHGAVVLNPGYCSVPPLFSLCLNWKGNRSSRN
DENIRVMESEINVYYKELSGLSPGFQMLTNQIQRLCMLLDVYLETECHDNSVEGPHEFPP
EKICLRLVRGPSRMKPFKYNYPQGFFSHR
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcagattctaagaagaggaaaccaaaagtgatccggagtgaggaaggaaagaga
agccgtcatgaagagcaggagggtagatattacagtgaggaagctgaagtggatttacga
gatccaaagaaggattacgacctctacaaggaaacctgtgaagatctgcagaaacttatg
gctgaaatccaggatcttaaaagcaagggcagcaaagatgcagctgcagagattgaagaa
aaaaaaatccagagttgtgtgcactttatgaccctaaagaaacttaatcgcctggctcac
attcgcctaaagaaggctcgagaccaaacccatgaggccaaacagaaggtggatgcatat
catctgcagctgcagaacttgctatatgaagtcatgcatcttcagaaggagatcacaaag
tgtctggaattcaagtcaaaacatgaggaaattaatctggtgagtgtggaagaattttac
agagaagctcctccagagatcagcaaggcagacattacttccagtgacccccaccagcaa
acactagcacgtctggactgggagcttgaacagaggaaaaggttagcagagaagtacaag
gagagcttggccagtaaggagaagattctgaaggagatagaagtcaagaaggaatatttg
agcagtctgcagccacagctccacagcattatgcaggcctcattgccagtacaggaatac
ctgtccatgccctttgactgcatgcataaacagtatgagatagcacgccatctccctgca
ccactgtacgtgctgtttgtgcaggccagcgcctacagccaggcatgtgcccatatgaag
agttactcccagtcctataggcaggacaagaagcttgtggtcaccattgaaggaagtgta
gaagaggcaaaagctttatttaaacctcctgaagattcccaagatgatgaaagtgattca
gatgcagaggaggagcaaacaacgaagcggcgacgcccaacacttggggttcaactggac
gataagaggaaggaaatgttaaagaggcatccaatgtgtgtttcccttataattaagtgc
aaagattgcagctctctatatttgactttctacttccttatgaacctcaacatactcact
gtaaaggcaaaggtcacaccagcatctgaattggtaaatgccatcagtgcgggcgatctg
ctgaaccctgattcagttctccggtgcctctacactggagatgatggcaagagaacccca
aatccagccaatcgataccagtttgataaagtgggaatcttggacctgagtgactatata
tcagatgtcggacacccttacctatgggtacaggcaatgggtggactgcatttcccaaca
gaccaaccgcagcttgctgtcatagcagacaacgctctcagtgccagtcacatggagaag
accattaagttgctgcggtcccggctactgtctcggctgtctttgcacaaacaatttgca
tctctggaacatggcatcattccgatttctggagattgtcaaaatctagtccctgccaag
gtggtatcacggttgagtaggtggagcatgatgacatatgaggattatctggtgctgcct
tatacaaagaatgttgtggagggtggactagctcaggaaactgatcattattactccctg
atgatcgagagaggaacagccaagcttcatggagcagtggtacttaatccaggatattgc
tcagttccaccattgttcagtctttgcctcaattggaaaggcaatcgcagctccagaaat
gatgaaaacatccgggttatggagagtgagattaatgtctactacaaggagctctctggg
ctttctccagggtttcagatgctgacaaatcaaattcagagattgtgcatgctgctggat
gtctatttggaaactgaatgccatgacaacagtgttgagggaccgcatgaatttcctcca
gagaagatatgtctgcgattagtcaggggaccaagccgtatgaagcctttcaagtataat
tatccacaaggattcttcagccaccgctga
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integrated database retrieval system
