Pseudophryne corroboree (corroboree frog): 134909171
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Entry
134909171 CDS
T11513
Symbol
ATG16L1
Name
(RefSeq) autophagy-related protein 16-1 isoform X1
KO
K17890
autophagy-related protein 16-1
Organism
pcob Pseudophryne corroboree (corroboree frog)
Pathway
pcob04136
Autophagy - other
pcob04140
Autophagy - animal
pcob04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
pcob00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
134909171 (ATG16L1)
04136 Autophagy - other
134909171 (ATG16L1)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
134909171 (ATG16L1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pcob04131
]
134909171 (ATG16L1)
03029 Mitochondrial biogenesis [BR:
pcob03029
]
134909171 (ATG16L1)
Membrane trafficking [BR:
pcob04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
134909171 (ATG16L1)
Others
Specific organelles associated proteins
Auto phagosome
134909171 (ATG16L1)
Mitochondrial biogenesis [BR:
pcob03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
134909171 (ATG16L1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
ATG16
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_WDR36-Utp21_2nd
WDR55
WD40_Gbeta
EIF3I
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
Beta-prop_Aladin
Beta-prop_WDR90_POC16_2nd
Beta-prop_DCAF4
Beta-prop_SCAP
Beta-prop_RIG_2nd
WDR90_beta-prop_4th
eIF2A
Beta-prop_EIPR1
NBCH_WD40
Beta-prop_WDR19_1st
Beta-prop_IFT122_1st
WD40_RFWD3
Beta-prop_ACSF4
Beta-prop_IFT140_1st
CCDC93_CC
Tricorn_2nd
Beta-prop_SPT8
CCDC39
V_ATPase_I
CC4_CEP85
ZapB
DUF7310
AP5B1_middle
HEF_HK
DUF2332
Mce4_CUP1
FKBP15
Lipoprotein_6
DUF1664
DUF6468
Fez1
STX6_10_61_N
Motif
Other DBs
NCBI-GeneID:
134909171
NCBI-ProteinID:
XP_063771788
LinkDB
All DBs
Position
4:complement(198153430..198364900)
Genome browser
AA seq
622 aa
AA seq
DB search
MATSCRTGGFPSWKLHISRELRRRDREQSQAFEDLILQYNRLLEKSDFQSVLADKLQVDK
YDQQSRHDLSPGPDGVRNEAILQDMAQMRIKHQEELTELHKKRGELAQTVIELNNQMQQK
DKEIQTNKATIEEYQRTISELETECQDLRNKLQELERTNQTLKDEYDALQITFNALEGKL
RKTTEDNQELVTRWMAEKAQEANRLNAENEKDSKRRQARLQKELAEAAKEPLSVEQDDDI
EVLNDNADPPGDAAVPTVIGRLSSKRLSQPAVGGLLDSITNIFGLSESPLLGHHSDTARR
RSISSLPASHDCPDAQTGGNREVRVPVAALHSFDAHDGEVNAVRFSPGSRLLATGGMDRR
VKLWEVIGDKCEAKGSLTGSNAGITSIEFDSAGSYILAASNDFASRIWTVEDYRLRHTLT
GHSGKVLSAKFLLDNARIVSGSHDRTLKLWDLRNKVCIKTVFAGSSCNDIVCTEQCVMSG
HFDKKIRFWDIRTECIVRELELQGRITALDLNPERTELLCCSRDDLIKIIDLRANAVRQS
FSAQGFKCGSDWTRVIFSPDGSYVAAGSVEGTLYFWNVLTGKVEKILGKQHSSSINAVAW
SPSGAYVVSVDKGSKGVLWSDF
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atggcaacgagctgtaggactggaggatttcctagctggaaactccacatctccagagag
ctgaggagaagagaccgagagcagagccaggctttcgaggaccttatcctacaatataac
cggttacttgagaagtctgactttcagtccgttttggctgataaattgcaagtggataag
tatgatcagcagagccgccatgacctcagcccaggaccagatggagtgcgaaatgaggcg
attctacaggacatggctcagatgaggataaagcaccaggaggagttaacggagctccat
aaaaaacgtggagagctggctcagacagtgatagaactgaacaaccagatgcagcaaaag
gacaaagaaatccagaccaacaaggcaacgatagaggaataccagcgcaccatcagtgag
cttgagactgaatgccaagacctgcggaataaactgcaggagcttgagcgcacgaaccag
acactgaaggacgagtacgacgcccttcagattacttttaacgccctagaagggaagctg
cggaaaaccacggaggataaccaggagctggtgactcgttggatggcagagaaagctcag
gaagccaatcgtctcaacgctgaaaatgagaaggactccaagagaagacaggcgcgcctg
cagaaagagttagctgaagccgctaaggaacccctgtcggtggaacaggatgatgatata
gaggtgttaaatgataatgctgatcctccaggggacgctgcagtacctacagttattggc
cgactttcaagtaagagactctctcagcccgccgtaggaggcctcctggattctatcact
aatattttcggcttgtctgagtctcccctcttgggtcatcattctgacactgccaggaga
aggtctatatcctctctcccagcctcgcatgattgtccagatgcccagactggaggtaac
agggaagtccgtgttccagttgcagcccttcactcctttgatgcccacgatggtgaggtc
aatgctgtgcgttttagcccaggctcccggttattggctactgggggaatggatcggcgg
gttaaactgtgggaggtcataggagataaatgtgaggcaaagggctccctcacagggagc
aatgctgggatcacaagcatagagtttgatagtgctggctcttacattttggctgcatca
aatgattttgccagcagaatctggacagtagaggattaccgccttcggcatacgttaact
gggcacagtggaaaggttttgtctgctaagttcttattggacaatgctcgaattgtgtca
ggaagtcatgaccggacattgaaactttgggatctgcgcaacaaagtctgtataaagacc
gtatttgctgggtccagctgtaatgacattgtctgtacagaacagtgtgtgatgagtggg
cactttgacaaaaagatccgcttctgggacataagaacagaatgtatagtacgtgagctg
gaactgcagggtaggatcactgccttagacctgaaccctgagaggacagagctgctatgc
tgctctcgagatgacttaattaagatcatcgacttgcgtgccaatgctgtgcgacagagt
tttagcgctcagggattcaagtgtggctcagattggactagagtaatatttagccctgat
ggtagttatgtggcagctggctcagtggaggggactctctatttctggaacgtgttgact
gggaaagtggagaaaatacttggcaaacagcacagttcctctattaatgctgttgcttgg
tctccttctggtgcctatgtggtcagcgtggacaaaggaagcaaaggagtattgtggtct
gacttttga
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