Pseudophryne corroboree (corroboree frog): 134909203
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Entry
134909203 CDS
T11513
Symbol
ATG4B
Name
(RefSeq) cysteine protease ATG4B isoform X1
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
pcob Pseudophryne corroboree (corroboree frog)
Pathway
pcob04136
Autophagy - other
pcob04140
Autophagy - animal
pcob04145
Phagocytosis
Brite
KEGG Orthology (KO) [BR:
pcob00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
134909203 (ATG4B)
04140 Autophagy - animal
134909203 (ATG4B)
04136 Autophagy - other
134909203 (ATG4B)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pcob01002
]
134909203 (ATG4B)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pcob04131
]
134909203 (ATG4B)
03029 Mitochondrial biogenesis [BR:
pcob03029
]
134909203 (ATG4B)
Peptidases and inhibitors [BR:
pcob01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
134909203 (ATG4B)
Membrane trafficking [BR:
pcob04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
134909203 (ATG4B)
Mitochondrial biogenesis [BR:
pcob03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
134909203 (ATG4B)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_C54
ATG4_LIR
Motif
Other DBs
NCBI-GeneID:
134909203
NCBI-ProteinID:
XP_063771903
LinkDB
All DBs
Position
4:205423229..205555695
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AA seq
390 aa
AA seq
DB search
MFGTTSLSSSFKNSTLTYDTLRFADAPDFPETAEPVWILGKKYSALTEKDEILKDVTSRL
WFTYRRNFPAIGGTGPTSDTGWGCMLRCGQMIFAQAIICRHMGREWRWDKQKPQEKYLNI
LAAFLDKKDSYYSIHQIAQMGVGEGKYIGQWYGPNTVAQVLRKLAAFDVWSSMVVHIAMD
NTVVTEEIRRLCRRGSCDPGPLCNGHAAASDSDMLWKPLVLLIPLRLGLSEINEAYIETL
KHCFMLPQSLGVIGGRPNSAHYFIGYVGDELIYLDPHTTQPAVESSDSGHLPDDSFHCQH
PPCRMHVSEIDPSIAVGFFCSSEQDFDNWCQHIRKISLTGGALPMFEVVDQLPLHLYNPD
VLNLTPDSSDADRLDRFFDSEDEEFEILSF
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgtttggaacaacctccctgtcgagttccttcaaaaactcaacactcacctatgacact
ctgcggtttgcggatgctccagatttccctgagacggcagagccagtctggatattggga
aagaagtacagtgcattgacagagaaggatgagattctgaaggatgtgacatccagactg
tggttcacttaccgaaggaacttcccagcaataggtggaacagggcccacgtctgacacc
ggctggggctgcatgctacgttgtgggcagatgatttttgctcaggctataatatgtcgg
catatgggacgagaatggagatgggacaaacagaaaccgcaggaaaagtacctgaacatc
ctggccgcttttctagacaagaaagacagttactactccatacatcagattgcccaaatg
ggagtcggtgaaggaaaatacattggacagtggtatggaccaaacactgtggcgcaggtg
ttgaggaaattagctgcttttgatgtgtggagctcgatggtcgttcacatagctatggac
aatactgttgttacagaggagataaggagactgtgcaggagagggagctgtgaccctggg
ccgctgtgtaatggacatgctgcagcctctgattcggacatgctgtggaagcctcttgta
ttactcataccactgcgcctggggctaagtgagatcaatgaagcatatattgaaaccctc
aagcactgcttcatgttaccgcagtccttaggcgttattggtgggcggcctaacagtgct
cattacttcataggatatgtgggagatgagctaatatacctggatccacacactacacag
ccagctgtggagtccagtgatagcggtcatttaccagatgacagcttccactgccagcac
cctccgtgccgcatgcatgtgtctgagattgacccctccattgctgtgggattcttctgc
agttcagaacaggattttgataattggtgtcaacacattagaaagatctctcttactggt
ggagcgttgcccatgtttgaggtggtggatcagttgcctctccatttatataatcccgat
gtactcaaccttacaccagattcctcagatgctgaccgccttgacagattttttgattct
gaagatgaagaatttgaaattttatccttttga
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