Pseudophryne corroboree (corroboree frog): 134909476
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Entry
134909476 CDS
T11513
Symbol
NCBP2
Name
(RefSeq) nuclear cap-binding protein subunit 2
KO
K12883
nuclear cap-binding protein subunit 2
Organism
pcob Pseudophryne corroboree (corroboree frog)
Pathway
pcob03013
Nucleocytoplasmic transport
pcob03015
mRNA surveillance pathway
pcob03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pcob00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
134909476 (NCBP2)
09122 Translation
03013 Nucleocytoplasmic transport
134909476 (NCBP2)
03015 mRNA surveillance pathway
134909476 (NCBP2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcob03019
]
134909476 (NCBP2)
03041 Spliceosome [BR:
pcob03041
]
134909476 (NCBP2)
Messenger RNA biogenesis [BR:
pcob03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
134909476 (NCBP2)
Spliceosome [BR:
pcob03041
]
Common components
Common spliceosomal components
Cap binding complex
134909476 (NCBP2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_10
Motif
Other DBs
NCBI-GeneID:
134909476
NCBI-ProteinID:
XP_063772439
LinkDB
All DBs
Position
4:complement(325212074..325230887)
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AA seq
152 aa
AA seq
DB search
MLKALRSDSYVELTLYRDQHFKGDKADQEKVLRQSCTLYVGNLSFYTTEEQIYELFSKSG
DVKKIIMGLDKVKKTACGFCFVEYYTRGEAEHAMRFINGTQLDDRIIRTDWDTGFREGRQ
YGRGRSGGQVRDEYRLDYDAGRGGYGKVVQTF
NT seq
459 nt
NT seq
+upstream
nt +downstream
nt
atgctgaaagcactgaggagcgactcctacgtggagctgaccctctaccgggaccagcac
ttcaagggtgacaaagctgatcaagagaaggtattgagacagagttgcactttgtatgtt
ggaaatttgtccttttacacaacagaagaacaaatctatgaattattcagcaaaagcgga
gatgtgaagaaaatcattatgggtcttgataaagtaaagaaaacagcctgtggattctgc
tttgttgaatactacaccagaggggaagctgagcatgcaatgagatttatcaatggtact
cagctagatgaccgaatcatcagaacagactgggatactggtttcagagaaggcagacag
tatgggcgtggcagatcgggtggtcaggtcagagatgagtatcgtctagattatgatgca
ggaagaggaggttatggtaaagtggtacagacattctga
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