Pseudophryne corroboree (corroboree frog): 134927225
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Entry
134927225 CDS
T11513
Symbol
VPS50
Name
(RefSeq) syndetin isoform X1
KO
K23288
syndetin
Organism
pcob Pseudophryne corroboree (corroboree frog)
Brite
KEGG Orthology (KO) [BR:
pcob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pcob04131
]
134927225 (VPS50)
Membrane trafficking [BR:
pcob04131
]
Protein recycling
Others
EARP complex
134927225 (VPS50)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
Motif
Other DBs
NCBI-GeneID:
134927225
NCBI-ProteinID:
XP_063777461
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All DBs
Position
5:75727836..76276063
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AA seq
985 aa
AA seq
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MFNPVTTCVGHTVSTALRHGLFPGWLCFHLTRGLKSPQDSVHDLSPVENFRIPTKEEQRE
FREKATDPQAEQELINSVGDVYFSNDSLDIVKYELERLPPVLTLQEIEEYRDQLKRQQAA
VSKKVADLILEKQPSYVKELERVTSLQTNLQLAAVICTNGRRHLNTAKEGFTQASLGLLA
SQRKRQLLIGLLKSLRTIKTLQRTDIRLSEMLEEEDYPGAIQLCLECQEAASTFKHYSCI
SELNSKLQDTLEQIEEQLDVALSKICKNFDVAHYTKVQQAYKLLGKTQTAMDQLHMHFTQ
AIHNTVFQVVLGYVELCAGNTDTKFQKLPYKDLCMHITSDSYIPCLTDLCKALWEVMLSY
FRTIEWHEKCDHEEPQATSDSNNVSATEENNFDRSYIKKKLEHGLTRIWQDVQLKVKTYL
LGTDMSSFKYDDFIIVLDIVSRLMQVGEEFCGSKSEVLQESIRKQSVNYFKNYHRTRLEE
LRMFLENETWELCPVKSSFSILQLHEFKCLGQSRSPSMSPSKQASATDSTAVSLFAQYTS
EGNPFEIQSAMKDDEAEDVLAANGYESDELEKSAYQEYDSDSDVPEELKRDYVDEQTGDA
PSKSVSRETLRSRKRSDYSLNKVNAPILTNTTLNVIRLVGKYLQMMTILKPIAFDVIHCM
SQLFDYYLYAVYTFFGRNEGYESTGLGLSSSRLRTTLNRIQESLIDLEVSSENVGSLVSS
EERKEKVPSPHLSHLVVLTASGTLYGLSERVVATESLVFLAEQFEFLQTHLDSVMPAAKK
PFLQQFYSQTVSTASELRKPIYWIVAAKAIDYEQLLLLMANVKWDVKEIMSQHNVYVDAL
LKEFEQFNKKLSELSKHVRIPLPVSNILWEHCIRLANRTLVEGYANVKKCSNEGRALMQL
DFQQFLMKLEKLTDIRPIPDKEFVETYIKAYYLTENDMERWIKEHREYSTKQLTNLVNVC
LGSHINKKARQKLLAAIDDLDRTKR
NT seq
2958 nt
NT seq
+upstream
nt +downstream
nt
atgtttaacccggttacaacctgtgtcggccacactgtttccactgcacttcgacacggg
ttattcccgggttggctctgtttccacttaacccggggtctcaaaagcccacaagacagc
gtccatgatctcagtcctgtggagaactttcgaattccaacaaaggaggaacagcgggaa
tttcgggagaaggcgactgatcctcaggccgagcaggagctgatcaacagcgtaggagac
gtatatttttccaatgactctcttgatatagttaaatatgaacttgagaggctgccgcca
gttctcacgctgcaggagattgaggagtacagagaccaactaaagagacaacaggctgca
gtatccaaaaaagtagcagatctgattctagaaaagcagccatcatatgtaaaggagttg
gagcgagtgacctctttgcagacaaaccttcaactagctgccgttatttgcactaatgga
aggagacacttaaacaccgcaaaagaaggttttacacaagctagcctgggactgctggca
agccagaggaaaaggcagctattgattggtcttctgaaatctctgaggacaattaaaaca
ctgcaaagaacggacatacggctgagcgaaatgttggaggaagaagattaccctggagcc
attcagttgtgcctggagtgccaggaggcagcgagtacattcaaacactacagctgtata
agtgaattgaattcaaagctgcaggacaccctagagcaaattgaggaacaattggatgtc
gcactctccaaaatctgcaagaattttgatgttgcgcattatacaaaggttcagcaagcg
tataaactactggggaaaacacagactgcaatggaccagttgcacatgcacttcactcag
gccatccacaacacagtctttcaggtagtcctgggatatgtggagctgtgcgctggaaac
acggatacaaaatttcagaaactgccttacaaagacctctgcatgcatataacatctgac
agctacatcccatgcttaacagacctctgcaaggccctttgggaagttatgctaagctac
tttcgtacaattgagtggcatgagaaatgtgatcatgaggagccccaagcgacatctgat
agtaataatgtgtctgcgactgaagagaataattttgatcgtagttacatcaaaaagaag
ctggaacatggattgacgcgcatatggcaggatgtacaactcaaagttaaaacctacctt
cttggaacggatatgtccagcttcaaatacgatgatttcattattgtattggatatagtc
agcaggctaatgcaggtcggggaagagttttgtggcagtaaatctgaagtcctgcaggaa
tctataaggaagcaaagtgtgaactattttaaaaattatcaccggacacgacttgaagaa
ctcaggatgttccttgaaaatgagacctgggagctgtgccctgtcaagtccagttttagc
atattacagttacatgaatttaagtgtttggggcagtctcgctccccatccatgtcaccc
agtaagcaagcatcagcgactgattccaccgccgtgtccttgtttgcacagtacaccagt
gaaggcaatccctttgagatacaatctgccatgaaagatgatgaagcagaggatgtactg
gctgccaatgggtatgaatccgatgagctggagaaaagtgcttatcaggaatacgacagt
gacagtgatgttcctgaggagctaaagagggattatgtcgatgagcagaccggggacgct
ccatctaaaagtgtttcaagagagaccctgaggagccggaagcggtcagattacagcctg
aacaaggtgaatgctcccatcctgacgaacactactctgaacgtaataagacttgtggga
aaatacttgcagatgatgactatactgaaaccgatcgcctttgatgttattcactgcatg
tcccagctctttgattactacctgtacgctgtgtacacattcttcggtagaaatgagggg
tacgaatccaccggacttggtctgagtagcagtagactcaggacaacgttgaacagaatt
caggaaagcctcattgacctggaagtgtccagcgaaaatgtgggatccctggtatcgtcc
gaagaaagaaaagagaaagtgccaagcccgcacctcagccacctcgtggtgctgacggcg
agtggtacactgtacgggctctccgagagggtagtggccacagagtccctggttttcctg
gcagagcagttcgagtttctccagactcaccttgactctgtgatgccagcagctaaaaag
cctttcctccagcagttctactcacagaccgtgtcaacagccagtgaactccgcaagcca
atctactggattgtagcggcaaaggccatcgattatgaacagttactgctgcttatggcg
aatgtgaagtgggatgtaaaagaaattatgtcgcaacacaatgtatatgtggatgcttta
ttgaaggaatttgagcagtttaataagaagttatctgagctatcaaagcatgtccggatt
ccgctgcctgtctccaatatactgtgggagcactgtatccgactcgccaacaggacgctt
gtggagggttacgccaatgtaaagaagtgcagcaacgaaggccgagctctgatgcagctg
gacttccagcagttcctgatgaagctggagaagctgactgacatccgtccgattcctgac
aaggaatttgtggagacttacatcaaggcctactacctgactgagaatgacatggagcgt
tggataaaagagcacagggaatactcaaccaagcagctaacaaatctggtgaacgtttgt
ctggggtctcacattaataaaaaggccagacagaagctactggcagctattgatgacctg
gaccggacaaaaagataa
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