Pseudophryne corroboree (corroboree frog): 134927377
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Entry
134927377 CDS
T11513
Symbol
SNX13
Name
(RefSeq) sorting nexin-13 isoform X1
KO
K17925
sorting nexin-13
Organism
pcob Pseudophryne corroboree (corroboree frog)
Brite
KEGG Orthology (KO) [BR:
pcob00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pcob04990
]
134927377 (SNX13)
Domain-containing proteins not elsewhere classified [BR:
pcob04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
134927377 (SNX13)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PXA
Nexin_C
PX
RGS
Syntaxin_2
Motif
Other DBs
NCBI-GeneID:
134927377
NCBI-ProteinID:
XP_063777808
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All DBs
Position
5:complement(134213628..134479929)
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AA seq
967 aa
AA seq
DB search
MIPKASLSIWGWGSLGGVLFLITFGPFAIIYLAFYILCFVGGGFVVTLLFGKLNSEKYLE
RCEHSFLPSTSAGIPKVLEDMKREARPIKIDRRVTGANMIDEPLQQVIQFSLRDYVQYWY
YTLSEDESFLLQIRQTVQNALVQFSTRSKEVDWQPYFTTRLVDDFATHLRAFRKAQQRMA
EKEEQKKGADTADDFVDTFFEVEVEMEKIVCRDLVCTSSKDEEGFLKDLCEVLLYLLLPP
GDFQNKIMRYFVREILSRGIILPLINQLSDPDYINQYIIWMIRDSNCNYEAFMNVIKLSD
NVGELEAVRDEAVEELQYLRSLDTVGDDINTIKNQINSLLFVKKVCETRIQRLQSGKEID
TVKLAANFGKLCTVPLDKILVHNVALQFFMDFMQQTGGQAHLFFWLTVEGYRVTAQQQLE
VLRSHQRDGKHQTNQTMGLLGAAAVGVFDQYLSEKASPRVQIDDNLLAKLDYVVSNEEPT
PEIFDEVQRKVYDIMLRDERFYPSFRHNTLYVRMLAELDMLKEPSFKGSDDGDGESFNGS
PTGSLNLSLDDLSNVSADEMVQIHAYISDTVHVDCDPYAVAGVCNEHGKTYALYAITVQR
RGLDGIEEMWKTYRRYSDFHDFHMRITEQFENLASLLKLPGKKTFNNMDKEFLEKRKTDL
NSYLQLLMTSELLKACPSLAHCVFDFLENKAYNKGKGDFARKMDTFVNPLRNSMRNVSNA
VKSIPDSLAEGMNNMGKMSERFGQDLKQSLFKAPILVPKPGSDPEHCRVSAQLDDNVDDN
IPLRVMLLLMDEVFDLKERNQWLRRQITSLLQQLIRATYGDTINRKIVDHVESMTSPDQV
ADYVKHFRDSFWPNGILAETTPRRDRSMRMRTRVAAKTKLIEIMPDELKHIIGAETTRKG
ILRVFEMFQQTQLNRRLAYVFLEGFLETLFSQCKFHELFNKLHSKSERMRKYKQRQQSSH
APALQKR
NT seq
2904 nt
NT seq
+upstream
nt +downstream
nt
atgatccccaaggccagcctttccatatggggatggggaagtctcggcggcgttctcttc
ctgatcacgtttggaccttttgctataatttatttagccttttacatcctctgctttgtg
ggtgggggttttgtagtcacacttctgtttggaaagttaaactctgaaaagtaccttgag
aggtgtgaacactcctttctgccatcaacatctgctggaatcccaaaggtcttggaggat
atgaaacgtgaagccagacccattaagattgacagaagagtgacgggggccaatatgata
gacgagcccttgcagcaagtaatacagttttccttgagggactacgtccaatactggtat
tacacgctcagtgaggatgaatcatttcttcttcaaatcaggcagacagttcaaaatgca
cttgttcagttttccacccggtcgaaagaagtcgactggcagccttactttaccacccgg
ttagtagatgattttgccactcacctccgagcatttagaaaagctcagcaaagaatggca
gagaaagaagaacaaaagaaaggtgcagacacagcagatgattttgtagatacttttttt
gaggttgaagttgaaatggagaaaatagtctgccgtgacctcgtctgcacttcttccaaa
gatgaggaagggttcctgaaggatttatgtgaagttttactgtatttattgctacctcct
ggagacttccagaataagatcatgcgatactttgtgagggaaatcctttcacgaggaatt
attcttcctttaataaaccagctcagtgatcctgattatattaatcaatatatcatttgg
atgattcgtgattccaattgcaattatgaggccttcatgaatgttattaagttaagtgac
aatgttggagagttggaagctgtgagggacgaagctgtagaagaattacagtatcttcgt
tcgttagataccgtaggagatgatatcaacactataaaaaaccagataaacagtttactg
tttgtaaagaaagtatgtgaaaccagaatacagagattgcagtctggaaaagaaattgat
actgtgaagttggctgcaaactttggaaaactttgcacagtccccctggacaaaattctt
gtacacaatgttgcactacagttttttatggattttatgcagcagaccggaggacaggca
cacctcttcttctggcttacggtggaaggatacagggtaactgcacagcaacagctggag
gtgttacggagccaccaaagggatgggaaacatcaaaccaaccaaactatgggcctttta
ggagccgctgctgttggagtatttgaccagtacttatcagaaaaggcatcgcctagagtt
cagattgatgacaacttgctagcaaagttggattacgtggtgtccaatgaggagccaaca
cctgagatctttgatgaggtccagagaaaggtgtacgacatcatgctgcgggatgaacgg
ttttatccctccttccgccacaatactctgtatgtgcggatgctggcagagctggacatg
ctgaaagagcccagctttaaaggatctgatgatggcgatggagaatcttttaacggatcg
ccaacgggcagcttaaatttgtctcttgacgacctgtcaaatgtcagcgctgatgagatg
gtacaaattcatgcttatatttctgacactgttcatgttgactgtgacccatatgctgtg
gcaggagtttgtaatgaacatggcaaaacctatgcactgtatgccatcaccgtccagcgg
cgaggcttagatggcattgaagaaatgtggaaaacctatcgccgttacagcgacttccat
gacttccacatgaggatcactgaacagtttgaaaacctcgccagcctcctgaagctgccg
ggaaaaaagaccttcaacaacatggacaaagaatttttagaaaagagaaaaacagatctg
aattcttacttacagttgttaatgacgtctgagttgctgaaggcctgtccatctcttgcc
cattgcgtatttgactttcttgagaacaaagcctacaataaaggaaagggggactttgca
cgtaagatggatacatttgtaaatccactgcgcaattcaatgagaaacgtttccaacgct
gtgaagtccataccagatagcttggctgaagggatgaataacatgggtaaaatgtcagaa
agatttgggcaagatctaaagcaatccttgtttaaggctccaattcttgtaccaaaacct
ggttcagatccagaacactgtcgggtgtcggcccaattggatgacaatgttgatgacaat
attccgctacgagtgatgcttctgctcatggacgaagtctttgacctaaaagaaagaaat
caatggttgagaagacaaattaccagcctccttcaacagctcattagagcaacatatgga
gacacaattaacaggaaaattgttgatcatgtggaatcaatgacgtcgcctgaccaagta
gcagattatgtaaaacatttcagagactcattttggccaaatggaatcttagcagagaca
actccacgcagagaccgcagtatgcggatgcgtacaagagtcgcagcaaaaacaaaactg
atagaaattatgccagatgaactgaagcacataatcggtgcagaaacgactcggaagggc
atccttcgagtctttgaaatgtttcagcagacccaactgaacaggagacttgcctatgtt
tttttagaggggtttctggaaaccttattttcacagtgtaagttccacgagctttttaat
aaactgcattccaaatcagaacgaatgcggaaatacaaacagagacagcaatcttctcat
gcacctgccttacagaaaaggtga
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