Pseudophryne corroboree (corroboree frog): 134927390
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Entry
134927390 CDS
T11513
Symbol
DHX15
Name
(RefSeq) ATP-dependent RNA helicase DHX15 isoform X1
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
pcob Pseudophryne corroboree (corroboree frog)
Pathway
pcob03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pcob00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
134927390 (DHX15)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pcob03041
]
134927390 (DHX15)
03009 Ribosome biogenesis [BR:
pcob03009
]
134927390 (DHX15)
Enzymes [BR:
pcob01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
134927390 (DHX15)
Spliceosome [BR:
pcob03041
]
Complex A
U2 snRNP components
U2 related factors
134927390 (DHX15)
Complex B
134927390 (DHX15)
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
134927390 (DHX15)
Ribosome biogenesis [BR:
pcob03009
]
Eukaryotic type
90S particles
Helicases
134927390 (DHX15)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
WHD_HA2
DEAD
AAA_22
AAA_19
SRP54
nSTAND3
Cas3-like_C_2
AAA_29
Flavi_DEAD
Atrophin-1
DUF3915
Motif
Other DBs
NCBI-GeneID:
134927390
NCBI-ProteinID:
XP_063777839
LinkDB
All DBs
Position
1:complement(1098028823..1098143798)
Genome browser
AA seq
760 aa
AA seq
DB search
MSKRHRLDLGDDYATSKKRGDGKERDRDRDDRSKDRDRDRDRDRERDRDKDKESRGTANT
PYITAAGVQAVKPAALAQGVNPFTNLPHTPRYYEILKNRLQLPVWEYKERFTDILMRNQS
FVLVGETGSGKTTQIPQWCVEYMRSLPGPKRGVACTQPRRVAAMSVAQRVADEMDVMLGQ
EVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPLLERYGVVILDEAHERTLATDILMGV
LKEVVRQRNDLKVIVMSATLDAGKFQVYFDSCPLLTIPGRTHPVEIFYTPEPERDYLEAA
IRTVIQIHMCEEEEGDLLLFLTGQEEIDEACKRIKREIDDLGPEVGDIKIIPLYSTLPPQ
QQQRIFEPPPPKKASGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVES
LLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLK
KLGIDDLVHFDFMDPPAPETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMV
IASCDYNCSNEILSITAMLSVPQCFIRPTEVKKAADESKMRFAHIDGDHLTLLNVYHAFK
QNHESNQWCYDNFINYRSLMSADNVRQQLSRIMDRFNLPRRSTDFTSRDYYINIRKALVT
GYFMQVAHLERTGHYLTVKDNQVVQLHPSTVLDHKPEWVLYNEFVLTTKNYIRTCTDIKP
EWLIKIAAQYYDMGNFPQCEAKRQLERIIAKFQTKEYSQY
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaagcggcaccggctggatctgggcgatgactatgccacgagcaagaagagaggc
gacggtaaggagagagatcgtgatagagatgaccgatcaaaagaccgggatcgtgataga
gatcgtgaccgtgaacgggatagggacaaagataaagagtcacgtggtacagcaaatacc
ccgtatatcacagctgcaggagttcaagctgtaaagccagcagcacttgcccaaggcgtg
aatccatttacaaatctaccacatacaccgcgctactatgaaatcttaaaaaatcgtctt
cagctgccagtttgggagtacaaagaacgttttacagatatcctcatgaggaaccagtcc
tttgttttggtgggagagaccggttctgggaaaactacacagattcctcagtggtgtgta
gagtacatgaggtcgttgccaggtcccaagagaggggttgcatgtacccaacccagaaga
gtagcggcaatgagtgtggcccagagagttgctgatgaaatggatgttatgcttggccag
gaagttggttactctattcgatttgaagactgcagcagtgcaaaaacaatcttaaagtac
atgactgatggtatgttactccgggaagctatgaatgacccactgttggagcgatatggt
gtagttattcttgacgaagctcacgaaaggactttagctacagatatcttaatgggagtt
ttaaaagaggtggtgcggcaaaggaatgatttaaaggtgatagtcatgagtgccactctt
gatgcaggcaaattccaggtttattttgatagctgtcctctgttaacaattcctggccgt
acacatcctgtagaaatcttttacactccagagccggagagggactacctagaagcagcc
atccgtaccgtgatccagattcatatgtgtgaagaagaggagggagatcttctactattc
ctcacagggcaagaggaaattgatgaagcatgtaaaagaattaaacgtgagatcgatgac
ttgggccctgaagttggagacataaagatcatccccttgtattctactctcccaccccag
caacagcagagaatctttgagccccctccacctaagaaagccagcggtgctataggaagg
aaagttgtggtttccaccaatatcgctgaaacctcgttaacaattgatggtgttgtattt
gttattgacccaggatttgctaagcaaaaggtgtataaccctcgtattcgagtagaatct
cttttggtgactgccatcagcaaggcttcggcgcagcaaagggcaggccgtgccggtcgt
accaggccgggaaaatgtttccgactttatacagagaaagcatacaaaacagaaatgcag
gacaacacataccctgagatcctgaggtctaatttgggctccgtcgtgctgcaactaaag
aaacttggtattgatgacttagtgcactttgactttatggatcccccagcccctgaaact
ttaatgcgagctctggagctgttgaattaccttgctgccttaaatgatgatggtgacctg
actgaactgggatccatgatggcagaatttccgctggatcctcagcttgccaagatggtt
atagccagttgtgattacaactgttctaatgagatcctatccattaccgctatgttgtca
gtcccacagtgttttattcgacccacggaagtcaagaaagctgcagatgagtccaagatg
aggtttgcccacatagatggcgatcatctgacgctgctgaacgtgtaccacgctttcaaa
caaaatcatgagtcgaatcagtggtgttatgacaacttcattaactacaggtccctgatg
tctgcagacaatgtacggcagcagctgtcacgaatcatggacagatttaacttaccgcgt
agaagcacagacttcacaagccgggattattacattaatattagaaaagctttggttacc
ggctattttatgcaggtggcacatttggaacggactggccattacctaaccgtgaaagac
aaccaagtcgtgcagttacacccctcaacggttcttgatcacaagccagagtgggtcctg
tataacgaatttgtactcacaacaaagaactatatccgcacatgcacagacataaagcca
gaatggttaataaaaattgctgctcagtactatgacatgggcaacttcccacagtgcgaa
gccaagaggcagttagagcggattattgccaaatttcaaacaaaggagtactctcagtac
tga
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