Pseudophryne corroboree (corroboree frog): 134927956
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Entry
134927956 CDS
T11513
Symbol
RBM22
Name
(RefSeq) pre-mRNA-splicing factor RBM22 isoform X1
KO
K12872
pre-mRNA-splicing factor RBM22/SLT11
Organism
pcob Pseudophryne corroboree (corroboree frog)
Pathway
pcob03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pcob00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
134927956 (RBM22)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pcob03041
]
134927956 (RBM22)
Spliceosome [BR:
pcob03041
]
Complex B
Other components
Prp19-related factors
134927956 (RBM22)
Complex C
134927956 (RBM22)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
STL11_N
zf-CCCH_RBM22
RRM_1
zf_CCCH_4
Torus
RRM_occluded
Nup35_RRM_2
zf-CCCH_2
zf-CCCH
RRM_YTH1
zf-CCCH_4
RRM_3
zf-CCCH_3
zf-CCCH_10
RRM_PARP14_3
zf-CCCH_12
zf-CCCH_PARP12
Motif
Other DBs
NCBI-GeneID:
134927956
NCBI-ProteinID:
XP_063779176
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All DBs
Position
5:complement(520098681..520260779)
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AA seq
425 aa
AA seq
DB search
MVLSGTPASTRTIEKRGLSCENRDSWEDFPILCQTCLGENPYIRMTKEKYGKECKICARP
FTVFRWCPGVRMRFKKTEVCQTCSKLKNVCQTCLLDLEYGLPIQVRDTGVSLKDDMPRSD
VNKEYYTQNMEREISNSDGTRPVGALGKATSSSDMLLKLARTTPYYKRNRPHICSFWVKG
ECKRGEECPYRHEKPTDPDDPLADQNIKDRYYGINDPVADKLLKRASTMPRLDPPEDKSI
TTLYVGGLGDTINESELRSHFYQFGEIRTITVVQRQQCAFIQFATRQAAETAAEKSFNKL
IVNGRRLNVKWGRSQAARGKEREREGIIESGLKLEPVPGLPGALPPPPTEEESTANYFNL
PPSGSSALVNIALPPPGLTGPPPGFGPHMFPPMAPPPFLRAPGHIHYPSQDPQRMGAHAG
KPSSA
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atggtcctttcaggaaccccagcatccactaggacgatagagaaaaggggactgtcctgc
gaaaatcgggacagttgggaggacttcccaattctttgccagacatgtctgggagaaaat
ccttatattcgaatgaccaaagaaaaatatggaaaggaatgcaagatatgtgcacgccct
tttacagtatttcgctggtgcccaggcgtacgcatgcgctttaagaagacagaggtttgc
cagacatgtagcaagttgaaaaacgtctgtcagacctgtctcctagacttggagtatgga
cttcccattcaagtgcgagacacaggggtttccttgaaggatgacatgcctagatctgat
gttaataaagagtactacactcagaatatggagcgagagatttcaaactctgatggaact
aggccagttggagctctaggaaaagctacatccagcagtgacatgcttttaaaactggcc
cgtaccactccttactacaaacgtaaccgtccccacatctgttctttctgggtgaaagga
gagtgtaaaagaggagaagaatgtccatacagacacgagaagcccacagatccagatgac
ccacttgctgatcagaatatcaaagaccgttattatggtatcaatgatcctgtagcagac
aaacttttgaaacgggcctctacgatgcctcgcctggaccccccagaagacaagagtatt
accaccctgtatgttggaggattgggtgataccatcaacgaatcagagctaaggagtcac
ttttaccagtttggtgaaatccgaacaatcacagtagttcagagacagcagtgtgccttt
attcagtttgccaccagacaagcagcggagacggccgcagagaaatcatttaataagctc
attgttaacggtcgacggcttaatgtcaagtggggaagatctcaggcagcccgagggaag
gaaagggagcgagaaggcattattgagtctggattgaaacttgaacctgttccgggtcta
ccaggagctttgccacctcccccaacagaagaggagtctacagcaaactattttaacctt
cccccaagtggatcgtctgcattggttaatattgctctgcctccacctgggttaactgga
ccacctccaggatttggcccacacatgttcccacctatggcaccaccaccatttcttcgt
gcccctggtcatatccattacccttctcaagatccccaaaggatgggagcacatgcagga
aagcctagcagtgcctaa
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