Pseudophryne corroboree (corroboree frog): 134928184
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Entry
134928184 CDS
T11513
Symbol
SS18
Name
(RefSeq) protein SSXT isoform X1
KO
K15623
protein SSXT
Organism
pcob Pseudophryne corroboree (corroboree frog)
Pathway
pcob03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pcob00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
134928184 (SS18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pcob03036
]
134928184 (SS18)
Chromosome and associated proteins [BR:
pcob03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
134928184 (SS18)
GBAF(ncBAF) complex
134928184 (SS18)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SSXT
Motif
Other DBs
NCBI-GeneID:
134928184
NCBI-ProteinID:
XP_063779701
LinkDB
All DBs
Position
5:complement(638979421..639072409)
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AA seq
418 aa
AA seq
DB search
MSVAFAAPRQRGKGEITPAAIQKMLDENNHLIQCIMDYQNKGKTSECSQYQQMLHTNLVY
LATIADSNQNMQPLLPALPTPTMPMGPAGMNPSGPPQPPRSHNMPSEGMVGGAPSAPHMQ
NQMNGQMPGPNHMPMQGPGPNQHNMTNSSMSMPTSNHGSMGGYNHSVPSSQNIPVQNPMT
MNQGQSMGNYGPRPSMSMQPNQGPMMHQQPSSQQYNMPQGGGQHYQGQQPPIGMMGQVNQ
GNHMIGQRQIPPYRPPQQGPPQQYSGQEDYYGDQYSHSGQGPSEGINQQYYPEGHNDYGY
QQPSYPEQGYDRPYEDSSQHYYEGGNAQYSQQQETYQGPPQQQAYQTQQQQYPTQQGYPG
QQQGYGPSQSGPGPQYPNYTQGQGQQYVAYRPTQPGPSQPQQQRPYGYDQGQYGNYQQ
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtggcctttgcagctcctcggcagcgggggaagggcgagatcacccctgccgcc
atacagaagatgttggatgaaaataaccatcttattcagtgtattatggattatcaaaat
aaagggaagacatctgaatgttctcagtatcaacagatgttacacacaaatctggtttac
ttggctaccatagcagactccaatcaaaatatgcaacctttattaccagcactacccaca
ccgactatgcctatgggtccagcagggatgaatccgagtggccccccacaaccaccacgt
tcacacaacatgccttctgaaggaatggtaggaggggccccatctgcaccacacatgcaa
aaccagatgaacggccagatgcctggaccaaaccatatgcctatgcaaggaccaggacct
aatcagcataacatgacaaatagctcaatgtctatgcctaccagtaatcatggttccatg
ggaggatataaccattctgtaccatcttcacaaaatattccagtacagaatccgatgact
atgaatcaaggccagtcaatgggcaactacggccccaggccaagcatgagtatgcagcca
aaccaaggcccaatgatgcaccagcagccttcttcacagcaatataacatgccacagggt
ggtggccagcattaccagggacagcagccacctattggaatgatgggccaagttaaccaa
gggaatcacatgattggtcaaaggcagattccgccatacagacctcctcagcaaggtcca
ccacaacagtactcaggccaagaagactattacggagaccaatacagtcatagcggtcaa
ggtccttctgaaggcattaatcaacaatattaccccgaaggtcataatgattacggttat
cagcaaccgtcgtaccctgaacaaggctacgataggccttacgaggattcctcacaacat
tactacgaaggaggaaatgcacagtatagtcaacagcaagaaacctatcaggggccgccg
cagcagcaagcctaccaaacccagcaacagcagtaccccacccagcaaggttatcctggc
cagcagcaaggttatggtccttcacaaagtggtccaggtcctcagtaccccaattacact
cagggacagggtcagcagtatgtggcatacagacctacacagccaggaccttcacagcca
cagcagcagagaccttatggatatgatcagggtcagtatggaaactaccaacaataa
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