Pseudophryne corroboree (corroboree frog): 134928261
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Entry
134928261 CDS
T11513
Symbol
CHD7
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 7
KO
K14437
chromodomain-helicase-DNA-binding protein 7 [EC:5.6.2.-]
Organism
pcob Pseudophryne corroboree (corroboree frog)
Brite
KEGG Orthology (KO) [BR:
pcob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pcob03036
]
134928261 (CHD7)
Chromosome and associated proteins [BR:
pcob03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
134928261 (CHD7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
BRK
Helicase_C
Chromo
ResIII
DEAD
HTH_CHD1_Hrp3
HDA2-3
Motif
Other DBs
NCBI-GeneID:
134928261
NCBI-ProteinID:
XP_063779846
LinkDB
All DBs
Position
5:682743239..682911871
Genome browser
AA seq
2974 aa
AA seq
DB search
MADPGMMSLFGEDGNIFSEGLEGLGECGYTENSVNSMAQQMPMDQGFGSLQSPLHHNPSS
QNQAKLTHFDHYNQYEPQKMHMMDQPTRMMANTPGNGIASPHSQYHNTPVPQVPHSGGQM
GVYPGMQNDRHGPPFVESGSMWAPRAVQVPDQIRPPYQQPQSQQQPSTPSGPQGPSHPQH
VQQMGNYMVRGDFAMQQHGPLQSQRVNQFSQGQDGLNQGNPFLGAAGPGHMSHVAQQNPN
MGPSLRHSVQQFHHHPPTALHGESVAHSPRFSPNPPQQGAVRPQSLNFNSRNQTVPSPTL
NSGQYSRYPYSNLNQGLVNNTGMNQNLGLTNNTPMSPSVPRYPNAVGFPSNSSQGLMHQQ
PIHPSGSLNQMNTQTMHPSQPQGTYASPPPMSPLKAMSNPAVTPPPQVRPGSAGIPLDVG
SYPNMPHPPTHQPPAGMGMGQRNMGPRNIPQGQAFIGMSSTPREMGGHMRPNGCPGVSHA
DPQAIQERMMSGQQHPSHQSFQQQMANCQPHPAMHHQSSPPSHSHHQPWTSLHQSPQSTP
QKVPVHQHSPSEPYLDKSMPDMTRIGGPNTSLLHTEDFLPSMQAQPPQKKRKKKNNHITA
DNASKGFGQEGFPGENPEFSIEGAPDGKKKKKPKVKKEPKEPKEPKAKKEPKEPKAPKQP
KAPKEPKEKKVKTTTPKAKSSKKASNKSDAEGSAQKKKVVKVKPEGAEGVEGAENVALDK
TPPPSPEEEDDSGIQKRRSSRQVKRKRYTEDLEFKISDEEIDDADPTGRDSPSNTSQSEQ
QESLDAEGPVVEKIMSSRMTKKQLESGEEVEVEEFYVKYKNFSYLHCQWATVEGLEKDKR
IQQKIKRFRAKQGQNKFLSEIEDDLFNPDYVEVDRLLDISNSTDEKGEPVTHYLVKWCSL
AYEDSTWELKQDLDPAKIEEYEKLQSREPETDRVERPPADEWKKSESSREYKNNNSLREY
QLEGVNWLLFNWYNTRNCILADEMGLGKTIQSITFLYEIFLKGIHGPYLVIAPLSTIPNW
EREFRTWTELNVIVYHGSQASRKTIQLYEMYFKDPQGRAIKGAYKFHAIITTFEMILTDC
PELRNVHWRCVVIDEAHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVEELFSLLNFL
EPDRFPSESNFMQEFGDLKTEEQVQKLQGILKPMMLRRLKEDVEKNLAPKEETIIEVELT
NIQKKYYRAILEKNFTFLSKGGGGGHANVPNLLNTMMELRKCCNHPYLINGAEEKILEEF
KEAHNGDFPDFPLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQR
RYPYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWN
PQNDLQAQARCHRIGQSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRENAT
NGVQQLSKKEIEDLLRKGAYGALMDEEDEGSKFCEEDIDQILSRRTHTITIESEGKGSTF
AKASFVSAGNRTDISLDDPNFWQKWAKKAELDLDVLNGRNTLVIDTPRVRKQTRLYSAVK
EDELMEFSDLESDSEDKPNIKPRRPQDKSQGYARSECFRVEKNLLVYGWGRWTDILSHAR
FKRQLSEQDVETICRTILVYCLNHYRGDENIKSFIWDLITPTEDGQTRALVNHSGLSAPV
PRGRKGKKVKSQNAQPVLKHADWLPSCNPDTLFQEDSYKKHLKHHCNKVLLRVRMLYYLR
QEVIGDQADNILEGADSSEADIWIPETFHAEVPTDWWDNEADKSLLIGVFKHGYEKYNSM
RADPALCFLERVGMPDAKAIAAEQRGTDMLADGGDGGDFDREDEDPEYKPTRLQFKDDID
EFANSPLDDKEECMDIDTQEKLGEDSTELGKLYWPNTSALTTRLRRLITAYQRSYKRQQM
RQEAQMKTDRRRRRPREEVRALEAEREAIITERRQKWTRREEADFYRVVSTFGVIVDTAK
QKFEWNQFRAFARLDKKSDDSLEKYFNCFVAMCRRVCHMSTKSEDDLCDMSMMIEPITEE
RASRTLYRIELLRKIREQVLHQPQLNERLKLCQPSLDLPEWWECGKHDKDLLIGAAKHGV
SRTDYHILNDPELSFLEAHRNFAQNRGSAHPNMPILIPPGSSYSDTPPIMPSTPVRDEKA
IEQEEIKSEKTEDVDIKEEAEIKEEEQVDSDEKSVKQESDHETLSVKNEIKNTEIADVDP
KSISEKGSEEDEEKLDDDDDKSEESSQAEVGLPSRDKNFDEESNASLSTARDETRDGFYL
EDCETSGLHMLRERTFSFSFWPKDRVMINRLDHICETVLKGKWPVNRRQMFEFPGLIPGY
TPTAVDSPLQKRSFAELSMVAQGNFSGSEDISASPQLSQESSLSLSVPRQRRRRRRKIEV
EAERAAKRRNLMEMVAQLRGSQIGAENGQEKVVDLSNASREATSSTSNFASLTSKFILPN
SSTPVSDAFKTQMERLQAGLSCTPTRHLLNGSLIDGEPPMKRRRGRRKNVEGLDLLFMSN
KRSSLSVDDSDVTKAYDEDLDTPPARNIPSPGQLEPETRIPVINLEDGTRLVGEDAPKNK
DLVEWLKLHPTYTVDMPSYVPKSTDMLFSPFQKPKQKRHRCRNPNKLDINTLTGDERVPV
VNKRNGKKMGGAMAPPMRELPRWLEENPEFAVAPDWTDIVKQSGFVPESMFDRLLTGPVV
REEGSSRRGRRPKSEIAKAAAAAAAVASTSGINPLLMNSLFAGMDLASLQNLQNLQSLQL
AGLMGFPSGLTTAAASGGDSKNPAAMLPLMLPGMAGLPNMFGLSGLLNNPLASGGGNSTT
ASSQRETEDGTSKSDDKTDSDVDGKDSEKNTHTVSTDSGAATTTTAGLTANHLAFSPFLL
STMAPGLFYPSMFLPPGLGGLTLPGFPSLAGLQSALSASEEKAADKEEAENPEDSDVEES
LDKTADSSVLEDDMAHGEELDSPNAEDDNFKDDE
NT seq
8925 nt
NT seq
+upstream
nt +downstream
nt
atggcggatcctggcatgatgagtctgttcggggaagacgggaacatatttagcgaagga
ttggagggccttggtgaatgtggatatacagaaaactctgtaaactccatggcgcagcag
atgccaatggatcagggttttggctctttgcagtctccactccaccataacccaagcagt
caaaaccaagcaaagcttacccactttgatcactataaccagtatgagccacagaaaatg
cacatgatggaccagcctactagaatgatggctaacactcccgggaatggtattgcctct
ccacattcacagtatcataacacacctgttccgcaggtcccccacagtggtggacaaatg
ggagtgtatcctggtatgcagaatgacaggcatgggccaccgtttgtagaaagtggttct
atgtgggcacctagggcagtacaggtgcctgatcagatacggcctccttaccagcagcca
cagtcacagcagcaaccatcaacaccttcaggacctcaaggtccgtctcaccctcaacat
gttcagcagatgggtaattacatggttcggggagatttcgcaatgcagcaacatggtcca
ctacagtctcaaagggtgaatcagttttcacaaggacaagatggtcttaaccaaggaaat
cccttccttggagctgcaggacctggtcacatgtctcacgtagcccaacaaaatcccaac
atggggccttcactgcgtcattcggtccagcaatttcatcaccatccccccactgctctt
catggagaatctgttgctcacagtcctaggttttctcctaaccctcctcagcagggtgca
gttaggccacagtcccttaattttaattcacgaaaccagactgtaccttcacctacgtta
aactcagggcagtattcccgctatccttatagtaaccttaatcagggattagttaataat
acagggatgaatcagaatttaggccttacaaacaacactccaatgtctccgtctgtacct
agatacccaaatgctgtggggtttccatcaaatagcagtcaaggactaatgcaccagcaa
cccattcatcctagcggctcacttaaccaaatgaacacacaaactatgcatccttcacag
cctcagggaacctatgcttcaccacctcccatgtcccccttgaaagcaatgagcaatcca
gcagtcacccctcctccacaagttaggcctggcagcgcggggatacctttggatgttgga
agttacccaaatatgccccatccacccactcaccagccccctgccggcatgggtatggga
caaaggaacatgggtcccagaaacataccacagggccaggcctttataggtatgtcctca
acaccaagggagatgggtgggcatatgagaccaaatggctgtcctggagttagccatgca
gatccacaggcaatacaagaacggatgatgtctggccagcagcatcccagtcatcaatct
tttcagcagcaaatggcaaactgtcagcctcatccagctatgcaccatcagtcttcacct
ccgtcacattctcatcaccaaccatggacttcgcttcaccagtcacctcagagtaccccc
cagaaagtgcctgtccatcagcattccccatctgaaccttatcttgataaatctatgccg
gatatgactcggattggtggccccaatacttctttactgcatacagaagacttcttgccg
tcaatgcaggctcagccaccacaaaagaaaaggaagaaaaaaaataaccatattaccgcg
gataatgcaagtaaaggttttggtcaggaaggtttccctggagagaacccggagttctca
atcgagggagcaccagatgggaagaaaaagaaaaagcccaaggttaaaaaggagcccaag
gagccaaaagagcccaaagcgaagaaagagccgaaggaacctaaggctcctaaacagccc
aaagctcccaaagaaccaaaagagaaaaaggtgaagacaacgacaccaaaagcaaagtcc
agcaagaaggcaagtaataagtctgatgctgagggcagtgcacagaagaaaaaagttgtc
aaagtaaagcctgaaggagccgaaggagttgaaggtgctgaaaatgttgcattagacaaa
acccctcccccttcaccagaagaagaggatgactcaggcatacagaaaaggcgctccagt
agacaggtgaagaggaagcgctacacggaagacctggagtttaagatttctgacgaggag
attgatgatgctgatccgacaggaagagattctccctcaaacacttcacagtctgaacag
caggagtctctagatgctgaaggacctgttgttgagaagataatgagcagtcgtatgaca
aaaaaacagctggagtctggggaagaggtggaagttgaagaattttatgtgaagtataag
aacttttcatatttgcactgccagtgggccaccgtggagggactggagaaagacaagagg
attcaacaaaaaatcaagcgttttcgagcaaagcaaggtcaaaacaagttcctttcagag
attgaagatgatctgtttaatcctgactatgtggaagtcgatcggttattggatatttcc
aacagcacagatgagaagggagagcctgtgacacattacttggtgaagtggtgttccctc
gcatatgaggatagtacatgggagctgaaacaggacttggatccagcaaagattgaagaa
tatgagaaactccagagcagggagccagaaacagatcgcgtggagcgacctcctgccgac
gagtggaagaaatcggagagttccagggagtataaaaacaataacagtctcagggaatac
cagttggagggagtgaactggctgctgttcaattggtacaacacacgaaattgcatttta
gcggatgagatgggtttgggcaaaaccatccagtcgatcactttcctgtacgagatcttt
ttaaagggcattcatggtccgtacttggtcattgctccactgtcaacaatcccaaactgg
gagagagagttccgcacgtggaccgagctgaatgtgatagtttatcatggaagccaagca
agcagaaaaacaatacaactctatgaaatgtactttaaagatccacagggccgagcaata
aagggtgcctataagttccatgccatcatcacaacttttgaaatgattctgacagactgc
cccgagctccgaaacgtacactggcgatgtgtggttattgatgaggctcaccgactgaaa
aacaggaactgcaaactattggaaggtctaaagatgatggatctggaacacaaagtgctg
ctaacagggacccctttgcaaaacactgtggaagagctcttcagcctcctgaatttcctg
gagcctgaccgcttcccttcagaaagcaacttcatgcaagagtttggcgatctgaaaact
gaagaacaggtacaaaaactacaagggatcctgaaaccaatgatgttaagacgtcttaag
gaagatgtagagaagaacttggccccaaaagaagaaaccattattgaagtagagttgacc
aacatccagaagaagtattacagagctattctggagaagaactttactttcctctccaaa
ggaggcggaggcggccacgcgaatgtccctaatctgctaaacactatgatggagctgagg
aaatgctgtaatcatccctaccttattaatggtgctgaagagaaaattttggaagaattt
aaagaagcgcacaatggtgactttccagattttccgctccaggctatgatccaggccgcc
ggcaaactagttctgattgacaagctgctgccaaaactgaaagctggtggccacagggtg
ctcatcttctcccagatggtgcgttgtttggacattctggaagactacctcatccaacgc
agatacccatatgagagaattgatggcagagtgagaggcaaccttcgccaggctgctatt
gacagattttccaagcctgattctgataggtttgtgttcctgctgtgtacaagggcagga
ggtctgggcattaatttaactgctgctgatacttgcattatctttgattctgactggaac
ccccagaatgaccttcaggctcaggctcgatgtcatcgcattggtcagagtaaatctgtg
aaaatttatcggctgatcaccaggaattcctatgagcgggagatgtttgataaggccagc
ttgaaactcggcctggacaaggcagtattgcagtctatgagtggaagagagaatgctaca
aatggggtacaacagctttccaaaaaggaaatagaagacttgttgcggaaaggggcatat
ggtgctctgatggacgaagaagatgaaggctccaagttctgtgaagaagatattgatcaa
attctctccagaagaactcacaccatcactattgagtctgagggaaagggctcaaccttt
gctaaagccagttttgtttctgctggaaatcggacggacatatctttggatgaccccaat
ttctggcaaaagtgggcaaagaaagcggaacttgatctcgatgtattaaatggaagaaac
accttggtaattgataccccacgagtaagaaaacagaccagactgtacagtgcagtaaag
gaggatgaactgatggaattctctgacttagaaagtgattctgaggacaaacccaacatc
aaaccacgtcggcctcaggacaaatctcagggctatgcaaggagtgaatgtttcagagtg
gagaagaaccttcttgtgtatgggtggggacgctggacagatattctttcccatgcgcgt
ttcaagcgtcagctttctgaacaagacgtggaaaccatctgtcgtaccattctggtctac
tgcctaaatcattacagaggggatgagaacatcaagagtttcatctgggacctcattaca
ccaacagaagatgggcagactcgtgctctggtgaaccactctggcctctctgccccagta
cccaggggaaggaagggaaagaaggtaaagagccagaatgctcagcctgtgctgaaacac
gcggactggctccccagctgtaacccagacaccttgtttcaggaggatagctacaaaaag
caccttaaacatcattgtaacaaggtcctgctgcgtgtccgcatgctgtactatctcagg
caagaagtgataggggaccaagctgacaacatcttggagggtgctgactcaagtgaggca
gatatttggataccagagacattccacgctgaagttcctaccgattggtgggataatgaa
gctgataaatcccttttaattggcgtcttcaaacatggttatgagaagtacaattccatg
cgggccgacccagctctgtgcttcctggagagagtcggtatgcctgatgctaaagcaatt
gccgctgagcagagaggaacagatatgttagcagatggtggagacggaggagactttgac
cgagaggatgaagatcctgaatacaaacccacaaggcttcaatttaaagatgacattgat
gaatttgcaaactccccccttgatgacaaagaggaatgcatggacatagacacgcaagag
aagcttggtgaggacagcacagagttgggcaaactctactggcccaatacctcagctcta
actacccgcctgcgacgcctcatcactgcctaccagcgcagttacaagcggcaacaaatg
aggcaagaagcgcagatgaagacagatcgtagaaggaggcggcctcgggaagaagtaaga
gcactggaagcagaaagagaagctattataacagagagacggcaaaagtggacccgaagg
gaagaggcagacttctatagagtagtgtcgacgtttggagtgattgttgacactgctaaa
caaaagtttgaatggaatcaattccgagctttcgcccgtctagataaaaagtctgatgat
agtttggagaagtatttcaactgctttgtggccatgtgcagaagagtctgtcatatgtca
accaagtctgaagatgacctgtgcgatatgtctatgatgattgagcctataacggaggaa
cgagcttctaggactctttaccgtattgaacttttgaggaaaattcgggagcaagttctt
catcagccacagttgaatgagcgtcttaagctgtgccagccaagcctcgacctaccagaa
tggtgggagtgtggaaaacatgacaaagacttgctgattggtgctgcaaaacatggcgtt
agtaggacagattatcacatcctcaatgatccagaattatcttttctagaggctcatagg
aattttgctcaaaacagaggaagtgcacatccaaacatgcccatccttataccccctgga
tccagttacagtgacacaccaccgataatgccctctacgccggttcgggatgaaaaagca
attgagcaggaggaaataaagtcagagaagactgaagatgttgacatcaaggaagaagca
gagattaaagaggaggagcaggtggactctgatgagaaatctgtaaaacaggagagcgac
catgaaacgcttagtgttaaaaatgaaattaagaatacggagatagctgatgttgatcca
aagtccatttcagagaagggttctgaagaagatgaagaaaagttggatgatgatgatgac
aaatctgaagagtcttcccaagcagaagtcgggctaccttctcgggacaaaaattttgat
gaagaaagcaacgcctccttgagcactgcacgggatgaaactcgcgacggcttctatttg
gaagattgtgagacatccgggcttcacatgctgcgagagaggacattctccttctctttc
tggcccaaggatcgtgtgatgatcaaccgattagaccacatctgtgagactgtgctgaaa
ggaaagtggccagtaaacaggcgccagatgtttgaattcccggggctcatccctgggtac
acaccaactgctgtggatagcccattgcagaagaggagctttgctgagctctccatggtg
gcccagggcaattttagtggaagtgaagatatctcagcctctccacaactgtctcaggaa
tcttcgttgagcttgtctgtaccacgtcagcgcaggaggaggaggcggaaaatagaggtt
gaagcagaacgagcggcaaagaggaggaatctcatggagatggtggctcaactgcgcgga
tctcaaataggggcggaaaatggacaagagaaagttgtggatttatcgaacgcctccagg
gaggcaacaagctctacctcaaattttgcatcacttacttccaagtttatcttgcctaat
tcctccacccctgtctccgatgccttcaaaacacaaatggagcgactgcaggcaggtctt
tcatgcacaccgaccaggcacctactcaacggttctttaatagatggtgagcctcccatg
aagcgaagaagaggaagaaggaaaaatgtggaaggtctcgatctgttgttcatgagcaac
aaacgtagttcgttatctgtggatgatagtgacgtgaccaaagcatatgacgaagatctt
gatacgccaccagccagaaacattccatctcccgggcagctggagccagagacccggatt
cccgtcattaacttggaggatgggaccagattagtgggggaggatgcaccaaaaaacaag
gatttggttgaatggttgaaactgcatcctacatacactgttgacatgccaagttatgta
ccaaagagcacagatatgttgttctccccatttcaaaagccgaagcaaaaacgtcataga
tgtcgtaatcctaacaagctggatatcaatacgttaacgggagatgaacgagtgcctgtc
gtgaataagcgcaatggaaagaagatgggtggcgctatggcccctcctatgagagagctt
cctcgctggttagaagagaacccagagtttgccgttgctccagactggacagacattgtt
aagcagtctggttttgttccggagtccatgtttgatcgtctactcactggacctgttgtg
agggaagagggatccagtcgaagagggagaaggccaaaaagtgaaattgccaaagcagct
gcagcagctgctgctgtagcctccacgtctggaataaacccactgctgatgaatagcttg
tttgctggaatggatcttgccagtcttcagaatctccagaatctgcagtcccttcagctt
gctggtcttatgggcttcccctcaggcctcacaactgctgctgcctctggaggggattct
aaaaatcctgctgccatgctgcctctgatgctgccaggcatggcagggttgcccaacatg
tttgggcttagtggacttttaaacaaccccttagcctctggtggtggtaactcaactaca
gcttccagtcaaagagaaactgaagatggcacttcaaagtcagatgacaagactgattct
gacgtggatggcaaagactctgagaaaaatacacacactgtttctactgactctggtgct
gctactaccaccacagctgggttgactgcaaatcatctggccttcagtcctttcctactg
tccaccatggctccaggcctgttctacccatccatgtttctacctccagggcttggagga
ttgacactgcctgggtttccatcactagctggacttcagagtgctttaagcgctagtgaa
gaaaaggccgctgacaaagaagaagcagagaacccggaagacagcgacgtagaggagagt
ctggacaaaactgcagattcatccgttttggaagatgacatggcacatggagaagaattg
gactctcccaatgccgaggatgataatttcaaagacgacgaataa
DBGET
integrated database retrieval system
