KEGG   Pseudophryne corroboree (corroboree frog): 134933058
Entry
134933058         CDS       T11513                                 
Symbol
THOC3
Name
(RefSeq) THO complex subunit 3
  KO
K12880  THO complex subunit 3
Organism
pcob  Pseudophryne corroboree (corroboree frog)
Pathway
pcob03013  Nucleocytoplasmic transport
pcob03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pcob00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    134933058 (THOC3)
  09122 Translation
   03013 Nucleocytoplasmic transport
    134933058 (THOC3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pcob03019]
    134933058 (THOC3)
   03041 Spliceosome [BR:pcob03041]
    134933058 (THOC3)
Messenger RNA biogenesis [BR:pcob03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     134933058 (THOC3)
Spliceosome [BR:pcob03041]
 Complex C
  Other components
   EJC/TREX
    134933058 (THOC3)
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    134933058 (THOC3)
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_IFT122_1st Beta-prop_WDR5 WD40_CDC20-Fz WD40 WD40_Prp19 Beta-prop_WDR3_1st Beta-prop_EML_2 WD40_WDHD1_1st WDR55 ANAPC4_WD40 Beta-prop_Aladin Beta-prop_WDR36-Utp21_2nd Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_WDR3_2nd Beta-prop_RIG_2nd Beta-prop_TEP1_2nd WD40_Gbeta Beta-prop_WDR90_POC16_2nd Beta-prop_WDR19_1st Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_IFT140_1st Beta-prop_Vps41 Beta-prop_WDR36-Utp21_1st DSE1_N Beta-prop_NOL10_N Beta-prop_TEP1_C eIF2A WD40_RFWD3 RMC1_N NBCH_WD40 WD40_MABP1-WDR62_1st WDR90_beta-prop_4th Beta-prop_WDR35_TULP_N Beta-prop_HPS5 Tricorn_2nd ASA1 PD40 PAC11 TRM82_WD Beta-prop_WDR75_1st Beta-prop_SPT8 Beta-prop_EIPR1 Beta-prop_NUP159_NUP214 Peptidase_S9_N B-prop_COPA_B_2nd Beta-prop_ACSF4 Beta-prop_WDR41 Cytochrom_D1 Beta-prop_ELP1_1st CNH WD_LRWD1 Ras
Other DBs
NCBI-GeneID: 134933058
NCBI-ProteinID: XP_063784079
LinkDB
Position
6:591182873..591219304
AA seq 319 aa
MSALGLQEHFRANCKTREFPAHLAKVHSVAWSCDGRRLASGSFDKSACVFVLEKDRLVKE
SNYRGHGDSVDQLCWHPSNPDLFVTASGDKTIRIWDVRTERSLTTVTTKGENINICWSPD
GQTIAVGNKDDVVTFIDVKTHRPKAEEQFKFEVNEISWNNDNNLFFLTNGNGCINILSYP
ELKPIQSINAHPSNCICIKFDPTGKYFATGSADALVSLWDIEELVCVRCFSRLDWPVRTL
SFSYDGKMLASASEDHFIDIAHVETGEKLCEVQCESPTFTVAWHPKRYLLAFACDDKDGK
YDSSREAGTVKLFGLPNDP
NT seq 960 nt   +upstreamnt  +downstreamnt
atgtcagcgctggggctgcaggaacacttccgcgctaactgcaagacgcgggagttccca
gcgcacctggctaaggtgcactcggtggcctggagctgtgacgggcgccgcctggcatcc
ggctctttcgataagagcgcctgcgtattcgtgctggagaaagaccgcctggtaaaagaa
agtaattatcgtgggcatggggatagtgttgaccaactctgctggcatccctcaaatcca
gatctctttgtcactgcatcaggagacaagacaatccgcatttgggatgttaggactgaa
aggagtcttactactgttaccacaaagggtgaaaatataaatatctgctggagtccagat
ggtcagaccattgcagtaggaaataaggacgatgtagtcaccttcatagacgtcaaaact
catcgccccaaagcagaagagcagttcaagtttgaagtgaatgaaatatcctggaacaat
gataacaatctgtttttcctcaccaatgggaatggctgcatcaacattctgagctatccg
gagctgaagccaattcagtccatcaatgcgcacccttcaaattgcatttgcataaaattt
gaccctaccgggaagtattttgctacaggcagcgctgatgcactagtcagtctctgggat
atagaggagctggtgtgtgtacgttgcttctcacggctggactggcctgtgagaacccta
agcttcagctatgatgggaaaatgctagcgtctgcatctgaggatcattttattgacatt
gcacacgttgaaacaggagagaagttgtgtgaagttcagtgtgagtcccccactttcacc
gtggcctggcaccctaagagataccttctggcctttgcttgcgatgataaggatgggaaa
tacgacagtagccgtgaagccggcactgtcaaattatttggtcttcctaatgacccttga

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