Pseudophryne corroboree (corroboree frog): 134944414
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Entry
134944414 CDS
T11513
Symbol
VPS8
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog isoform X1
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
pcob Pseudophryne corroboree (corroboree frog)
Pathway
pcob04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
pcob00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
134944414 (VPS8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pcob04131
]
134944414 (VPS8)
Membrane trafficking [BR:
pcob04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
134944414 (VPS8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_VPS8
TPR_Vps8
VPS8_N
zf_RING_Vps8
Clathrin
TPR_VPS8_2
Beta-prop_WDR36-Utp21_1st
zf-RING_Vps41
WD40_CDC20-Fz
TPR_Vps41
zf_RING_Vps8_fungal
zf-RING_11
Beta-prop_EML_2
Beta-prop_WDR5
zf-RING_2
Beta-prop_WDR3_1st
WDR55
Beta-prop_HPS5
zf-RING_UBOX
Beta-prop_THOC3
WD40_Prp19
EIF3I
Motif
Other DBs
NCBI-GeneID:
134944414
NCBI-ProteinID:
XP_063789061
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All DBs
Position
7:35542311..35775715
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AA seq
1475 aa
AA seq
DB search
MAGTHRRGLGTSGSALRRRRLGTLQLLWFLVEERERCSVAGRMESDPGEDDLSAKGWDSG
RMTSETLALPGNVEDELIKSQNLTGFLDVDKDLDSKQELIDDKEFDIPQVDTPPTLESIL
NETDDEDEPFIPEDPALLNVETIDTHSCDTSSLASSDSGDRAHKRKKRLPDAFSRHGSVM
RHSLLKGISAQIVSAADKVDAGLPTAIAVSNLIAVGTSHGLALIFDTNQALRLCLGSTAV
GAQYGAVSALSINNDCSRLLCGFAKGQITMWDLASGKLLRTITDAHPPGTAILHIKFTDD
PTLAVCNDSGGSVFELTFKRVMGVRTCESRCLFSGSKGEVCCIEPLRTKAEMRDHPITQY
SLLAMASLTKILIIGLKPSLKVWMTFPYGRMDPSSVPLLAWHFVILQGALNPMLAFCRGD
VVHFLLVKRDESGAIHINKQKQLHLHYDLINFTWINARTVALLDSAEKLHVIDRQTQERL
ETLEISDFQLVYNSSHFKSLATGGNVSQALALVGEKACYQSISNYGGQIFYLGTKSVHVM
MIRTWRERVDHLLKQDCYNEALALAWSFHEGRAKAVVGLSGDPKKRKSVVADKIVEILLQ
YIDKALRKCPEQGKIQVMEQHFQDTVPVMVEYCLLLQRTDILFSQMYDKLSENCVAKGVF
LECLEPYLLRDKLPGLTTHVMKDLLLHFQDRGLMESVEACIVHMDITSLDIQQIVQMCWE
HRLYDAMIYVYNSGTNDFISPMEKLFKSISAPISSGKSLTDEQVVMGNKLLVYISSSLAG
RAYPLGDIPEDLVPQVKNQVFEFLIHLHSPEAPHDEEVYPYIRTLLHFDTREFLNVLALT
FEDFTNDKQAVEHQQRIVDILLKVMVENSDFTPSQVGCLFTFLARQLAKPDNTLFVNRVL
FDQVLEFLCSPDDDSRHSERQQVLLELLQAGGIVQFEENRLIHLAERAQFYQICEFMYER
KHLYDKIIDCYLLDPIRKQDVFNYIHNILSMPGYSPEEKQAAWDKAMKHMEELVTLSPSK
AADLVCTHFNEQLDEVIAKLQNKLMLFQFLRSLLDPRDGAQLSPELLQNQPHVTELFIDL
MCQYDPGHVTAMLQILEHYRLEETIQIAQKHKNHETLAYLLEKKGDIQAAFQVMLTRLQD
RLSALTADSVDAAAAKEPTNLTHIRETLSETISLCERTSHTLTLQQREALWFPLLEAMMS
PQKLLNSSSTQLYSEPLKSLTMEVLNSMAAYISLPSILQRILQDPVYGRGKLGEIQGLVL
GMLDTFNYEQTLLETTTNLLNQDLHWSLRNLKASITKALVPKQDYCCVCLQQYKKRQEAS
DDIIVFSCGHLYHSVCLVGKDCKVEAGGQSNWTCYRCNSRGKGRTGRQSVADAKRGRAAS
LVQVRAASANPPGEEAAKKPSSDSVLDPHQLQAFMELCRHYKATSRLALLTELCRSQSPE
KPSAYHSPYGGVASSSVFQNENFQLHLAPPPIIDD
NT seq
4428 nt
NT seq
+upstream
nt +downstream
nt
atggctggaacgcacaggagaggactcggcacttccgggagtgcgctgcgcaggcgcaga
ctggggacacttcagctgctgtggttccttgttgaggagagagagcgttgctcggtggcc
gggcgcatggagtcggatcctggagaggatgatcttagcgccaagggctgggactccgga
aggatgaccagcgaaacccttgcattacctggaaacgtagaagatgagttgattaaatcc
cagaatcttacaggcttcctcgatgtggacaaggatttggattccaagcaggagctgatc
gacgacaaagaatttgacattccccaagtggacactcctccaacactggagagcatcctc
aacgagacggatgatgaggatgaacctttcatacctgaggatccggctcttctgaacgta
gagaccatagacacccactcctgcgacacctcgtcactggccagctcagacagtggtgac
cgggcacacaaaaggaagaagaggctaccggacgccttctcccgtcatgggtctgtgatg
cgccacagtctgctgaaagggatttctgctcagatagtgtcagctgccgataaagtggat
gctggtttgcccacggcaattgcggtctccaatctgattgcagtgggcacgtcccatggt
ctggctttgatatttgacactaaccaagccctgcggctctgtctgggcagcaccgcggtg
ggcgcgcagtatggggccgtttcagctttgagcattaacaatgactgctccaggctactc
tgcggttttgccaaagggcagattacaatgtgggacctggccagtgggaaacttttgaga
actataacggatgcccacccccccggaacggctattttgcatataaagtttacagacgat
ccaacgcttgccgtctgcaatgatagtggcggatccgtgtttgagctgacgttcaaacga
gtgatgggagttaggacctgtgaatccaggtgcctgttcagcggatccaagggggaggtt
tgttgtattgagccccttcgcacaaaggccgagatgcgggaccatccgattacgcagtat
tcgctgctggccatggcgtctctaactaagatactcattattgggttaaagccctctctg
aaagtttggatgacttttccgtatggccggatggacccctccagcgtgccacttctggcc
tggcactttgtcatcctgcagggagccctgaaccccatgctggcgttttgcagaggggac
gtggtgcatttcctcttggtgaagagagatgaatctggagcaatccacataaacaagcag
aagcagctccacttgcactatgatctcatcaacttcacgtggatcaatgctcgcacagtg
gcactcctggacagcgcagagaagctccatgtgattgaccgtcagactcaggagaggctg
gagactctggagatatcggatttccagttggtgtacaatagcagccacttcaagtctctg
gccactgggggcaacgtcagccaggctctggctctggttggagagaaagcttgttaccag
tccatcagcaattatggaggccagatcttctatctgggaacaaagtcggtgcacgttatg
atgatcaggacctggcgcgagagagtcgatcatctgctgaagcaagactgttacaacgag
gccctggcgctggcgtggtcgttccatgaaggcagagcgaaagccgtcgtgggtctgtcg
ggggacccaaagaagaggaagagtgtggtggctgataagatagttgagatattgctgcag
tacattgacaaagccctgcggaagtgccctgagcagggcaagatccaggtcatggagcaa
catttccaggacacggtgcctgtcatggttgagtattgcctgcttctgcaacgcacggac
atcctcttcagccagatgtatgacaagctgagtgagaactgtgtggctaagggagtcttc
ttggagtgcctggagccctatcttctgcgggacaagctgcctggtctcaccactcacgtc
atgaaggatttgctcctccacttccaggatcgcggcctgatggagagtgtggaggcctgt
atagtgcacatggacatcaccagcctggacatacagcagattgtccaaatgtgctgggag
cacaggctgtacgatgcaatgatttatgtgtacaacagtggtaccaacgattttatcagc
cccatggagaaattgttcaaatccatttctgcaccgatcagctccggcaaatccctgaca
gatgaacaagttgtgatgggaaacaagctcctcgtttatataagctccagtttggctggg
cgggcgtatcctttgggagacatcccggaagacttagttccacaggtgaaaaaccaggtc
tttgagttcctcatacacttgcactcgccagaggccccccatgatgaggaggtgtacccc
tatatccgcaccttgctgcattttgacacacgagagttccttaatgttttggcattgaca
tttgaggactttacaaatgataaacaagcagtggagcaccagcagcggatcgtggacatc
ttactgaaggttatggttgagaactctgacttcacgccttcccaggtgggatgtctcttc
acattcctggcgcgtcagctggcgaaaccagataatacgctcttcgtcaacagagtgctt
tttgaccaggttctggagttcttatgtagcccagatgacgattcccgacactcggagaga
cagcaggttcttctagaactgctccaggccggaggaattgtccagtttgaggagaacaga
ctgatccacctagcggagcgagcccaattctaccagatctgcgaattcatgtatgagcgg
aaacacctgtatgacaagataatagactgttatttgctggatcccatcagaaagcaagat
gtctttaactacatacacaacatcttgtcaatgcctgggtacagtcctgaggagaagcag
gcagcatgggacaaagccatgaaacatatggaggagctggtgacgttgagtccaagcaaa
gccgccgacctggtttgcacacactttaatgaacagctggacgaagtcattgccaagctt
cagaataaattgatgcttttccagtttcttagaagtctcctagacccaagggatggagct
cagctcagcccagaactgctgcagaatcagccccacgtaacggagctcttcatagacctt
atgtgtcagtacgatcctggccacgtgactgcaatgctgcagatcctggaacattaccga
ctggaagagactattcagattgcacaaaagcacaaaaaccatgaaaccttggcctatctc
ttggagaagaagggggatatccaggctgctttccaagtcatgctcacgaggctgcaggac
agactctcggcactgacggcagactctgttgatgcagcagctgcgaaagaaccgaccaac
ttaacacatatcagggaaactctatcggagaccatctccttgtgtgagaggacgtcacac
actctcaccctgcagcagcgagaggcgctgtggtttcctctgctggaagcaatgatgtcc
ccacagaagctcctaaattcctcctcaacccagttatattctgagccattgaagagtctg
acaatggaggtacttaatagcatggcggcatatatctcccttccgtccatactgcagagg
atcctgcaggatcctgtatacgggagagggaagttaggagaaatccaaggcttggtgtta
ggcatgctggatacctttaactatgagcagacactactggaaaccactacaaacctgctg
aaccaggacctgcactggtctctgcgaaacctcaaggcttccattaccaaagctctcgtc
ccaaagcaggactactgctgtgtgtgcttgcagcagtacaagaagaggcaggaggcgtct
gacgacatcatagtgttcagctgtggacatctgtaccactccgtctgtcttgtgggaaag
gactgcaaggtggaagcggggggacaaagtaactggacttgttaccgctgtaactcacgc
ggaaaagggcggaccggccgccagtcagtggctgacgcaaagcgtggaagggctgcatct
ttggtgcaggtgagagctgcgtctgccaatccgcccggggaggaggctgccaaaaagcca
agctccgattctgtccttgatccgcaccagctgcaggcattcatggagctctgccgtcat
tacaaagcaacctcccggctggctctactgacggagctgtgccgctctcagagccccgag
aaaccatccgcctaccactctccgtatgggggggtcgcctccagcagcgtattccagaat
gagaacttccagctgcacctggcgccaccgcctatcattgatgactga
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