Pseudophryne corroboree (corroboree frog): 134944832
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Entry
134944832 CDS
T11513
Symbol
SPOPL
Name
(RefSeq) speckle-type POZ protein-like
KO
K10523
speckle-type POZ protein
Organism
pcob Pseudophryne corroboree (corroboree frog)
Pathway
pcob04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
pcob00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
134944832 (SPOPL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pcob04121
]
134944832 (SPOPL)
Ubiquitin system [BR:
pcob04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
134944832 (SPOPL)
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Gene cluster
GFIT
Motif
Pfam:
MATH_2
BTB
BACK_BPM_SPOP
MATH
BTB_2
BTB_KLHL33
Motif
Other DBs
NCBI-GeneID:
134944832
NCBI-ProteinID:
XP_063789795
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Position
7:149419480..149580934
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AA seq
392 aa
AA seq
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MSGGSTPPPTVEMSCGPVAESWCYTQVKVVKFSYMWTINNFSFCREEMGEVLKSSTFSSG
PNDKMKWCLRVNPKGLDDESKDYLSLYLLLVSCPKSEVRAKFKFSLLNAKREETKAMESQ
RAYRFVQGKDWGFKKFIRRDFLLDEANGLLPDDKLTLFCEVSVVQDSVNISGQSNTNNLK
VPECRLAEDLGYLWETTRFTDCSLYVGGQEFKAHKSILAARSPVFSAMFEHEMEESKKNR
VDIHDIDPEVFKEMMRFIYTGKAPNLDKMADNLLAAADKYALERLKVLCEEALCSNLSVE
NVADVLILADLHSAEQLKAQAIDFINRCSVLRQLGCKDGKNWNGNQATDIMETAGWKSMI
QSHPHLVAEAFRALASAQCPPFGIPRKRLKQS
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgtctggaggttccacgccgccccccactgtagagatgtcctgtggacctgtggcagag
agctggtgttatacccaggtgaaagtagtgaaattttcctatatgtggaccataaataac
ttcagtttttgccgagaagaaatgggtgaagttttaaaaagttctactttttcatcaggg
ccaaatgataaaatgaaatggtgcttgcgagttaacccaaaaggacttgatgatgagagc
aaggattatctgtccttgtatttgctgttggtcagctgtccgaaaagtgaagttcgagcg
aagtttaaattttctctgttgaatgccaaaagggaagaaacaaaagccatggaaagtcaa
agagcttaccggtttgtgcaaggcaaagactggggctttaagaagtttatcagacgtgat
tttttacttgacgaagcaaatggtcttttaccagatgataaacttacgctgttctgtgag
gtgagtgtggttcaagattctgtgaacatatcagggcagtccaatacaaacaatctgaaa
gtcccagaatgccgcctcgctgaagacctgggttatctgtgggaaaccacaaggtttaca
gactgcagcttatatgtaggaggtcaggaatttaaagctcataaatctattcttgcagct
cgttccccagtgttcagtgcaatgtttgaacatgaaatggaagaaagtaaaaagaataga
gtagacattcacgatattgaccccgaagtatttaaagaaatgatgagatttatttatacc
ggaaaagcccctaatcttgacaagatggctgataacttgttggcagcagcggataaatat
gctttggaacgactcaaagtcctgtgcgaagaggctttgtgtagtaacctgtcagtggaa
aatgttgccgatgtccttatcctcgcagatttgcacagcgcagagcagctgaaagcacaa
gcaatagactttattaacagatgtagtgttctcaggcaactgggttgcaaggatgggaaa
aactggaacggcaatcaagcaaccgacataatggagacagctggctggaaatccatgatc
caatcacatccacacttagtagcagaggccttccgagcactcgcatccgcacagtgtcca
ccttttggaattccaagaaagcggctaaaacagtcctga
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