Pseudophryne corroboree (corroboree frog): 134945103
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Entry
134945103 CDS
T11513
Symbol
CPSF4
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 4 isoform X1
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
pcob Pseudophryne corroboree (corroboree frog)
Pathway
pcob03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pcob00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
134945103 (CPSF4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcob03021
]
134945103 (CPSF4)
03019 Messenger RNA biogenesis [BR:
pcob03019
]
134945103 (CPSF4)
Transcription machinery [BR:
pcob03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
134945103 (CPSF4)
Messenger RNA biogenesis [BR:
pcob03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
134945103 (CPSF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
zf-CCCH_2
zf-CCCH_3
Torus
zf-CCHC
zf-CCCH_12
zf-CCCH_4
zf-CCCH_RBM22
zf-C3H1
GAF_PdtaS
Nab2-like_zf-CCCH_
Motif
Other DBs
NCBI-GeneID:
134945103
NCBI-ProteinID:
XP_063790233
LinkDB
All DBs
Position
7:282129922..282255034
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AA seq
284 aa
AA seq
DB search
MLIPGVCENWALVTMQELIACVDHIRFDLELAVEQQLGAQPLPFPGMDKSGAAVCEFFLK
AACVKGGGMCPFRHISGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGEC
SNKECPFLHIDPESKIKDCPWYDRGFCKHGPLCRHRHTRRVICVNYLVGFCLEGPNCKFM
HPRFELPMGATEQPPLPQQTQTQQKQNNNQPTQRSSSLIQLTSQSSPISQQRSPQTIGVM
QSQNNNIGNRGPRPLDQVTCYKCGEKGHYANRCTKGHLAFLSGQ
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgctgatacccggtgtgtgcgagaactgggctttggtcacgatgcaggagcttatcgcc
tgtgtggatcatattcgcttcgacctggagctggctgtggagcagcagctgggggcacag
ccgctcccgttcccgggcatggacaagtccggggcagctgtgtgcgagtttttcttaaaa
gcggcctgcgtcaaaggtgggggtatgtgtccttttcggcacataagtggggagaagacg
gtagtgtgcaagcactggttacgagggctctgtaagaaaggtgaccagtgtgagttcctg
catgaatatgacatgaccaaaatgccagagtgttacttctactccaagtttggcgagtgc
agtaacaaggagtgtccatttttacacattgacccagaatcaaagataaaagactgccct
tggtatgatcgaggcttctgtaaacatggccctctgtgcaggcatcggcatacacgtaga
gttatctgtgttaactatctggtgggattttgtctggagggcccaaactgtaaatttatg
cacccacggtttgaattgcctatgggagcaactgaacagcctcctctacctcaacaaacg
cagacccagcaaaagcaaaataataaccagccgacgcagagatcatcttcactcatccag
ttaacaagtcagagctcacctatttcccagcaacgctctccacagactattggtgtcatg
cagtcacagaacaacaatataggaaatcggggacctagaccacttgatcaggtcacatgc
tataagtgcggtgagaaaggacattatgccaacagatgtacaaaaggccatttggcattc
ctgagtggccagtga
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