Pseudophryne corroboree (corroboree frog): 134945928
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Entry
134945928 CDS
T11513
Symbol
RNF40
Name
(RefSeq) E3 ubiquitin-protein ligase BRE1B isoform X1
KO
K10696
E3 ubiquitin-protein ligase BRE1 [EC:
2.3.2.27
]
Organism
pcob Pseudophryne corroboree (corroboree frog)
Brite
KEGG Orthology (KO) [BR:
pcob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pcob04121
]
134945928 (RNF40)
Enzymes [BR:
pcob01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
134945928 (RNF40)
Ubiquitin system [BR:
pcob04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
BRE1 proteins
134945928 (RNF40)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRE1B
CC_Bre1
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
zf-RING_5
BRE1
zf-RING_2
zf-rbx1
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
134945928
NCBI-ProteinID:
XP_063791559
LinkDB
All DBs
Position
7:complement(515332323..515603325)
Genome browser
AA seq
984 aa
AA seq
DB search
MSGAGSKRASGDGTSGPPEKKPNHEEKTPTTLIEPIRLGGISSTEEMDMKVLQFKNKKLA
ERLEQRQGFEDELREKIEKLEKRQATDDATLLIVNRYWSRLDENVQVLLKRYDQEAGFQS
CVPDGPPEAKESSVESEAGVKGLPPSEGSDVKDSPEPPLAPPPAVSSVLPESSLNFLATL
ACSTTEEIELQLQERMEFSKRAVSCVVETSNKLHRRMQELCERIQSADFDQLDETLRSLN
KDLISENNRLQDLSTVLQEKHHRISLQHHELQDRVISSETKVSEMERSIEDLQWDIEKLR
KHEQKLNRHLAEALEQLNSGYHISGSSGSFQGGQTTLTVQKFEMLNAELEQNQELANNRM
CELEKLQNELQAAVRLKEKLKLDLRTLPEEAVRGTQDFRCLQSQFSLLYNESLQVKTQLD
EARALLLNTKNSHLRQIERMESEELSVQKKLRTEVIQLEDTLAQVRKEYEMLRIEFEQNL
AANEQAGPINREMRHLIGSLQNHNHQLKGDVQRYKRKVRDAQGEVSKMRLQVGAPPCPAP
SLSSAEMMTTTVVKEEEADVKKEQPGVVMRDPETPTTPEVKKEEEEQRKEPERSKTRERE
MDREREKERDREKDRDRDRDKQKTDDSKRKDSDILKQLRVELKKAQESQKEMKLLLDMYK
SAPKEQRDKVQLMAAERKTKAEVEELRLRVQALEEKDRRERKKLADEEALRKIKLAEEQI
DHLQRKLSATKQEEEALLSEMDVTGQAFEDMQEQNIRLMQQLREKDDANFKLMSERIKSN
QIHKLLREEKEELADQVQGLKTQVDAQLLQVQKLEERERLLHTSLAAIEKELTLRTQALE
IQKRKAVEAAQLSEDLKVQLEHIVSTLRDTQSFVCDNRTAKEKESFSLKRAQEEISRLRR
KLEKQKKMEVYADADQILQEEIKEYRARLTCPCCNTRKKDAVLTKCFHVFCFECVKTRYD
SRQRKCPKCNAAFGAHDFHRIYIN
NT seq
2955 nt
NT seq
+upstream
nt +downstream
nt
atgtctggtgccggcagtaagagagcctcaggggacgggacatctggtccgccagagaag
aaacccaaccatgaggaaaagaccccgactacgctgatcgagcccatccgcctggggggc
atctcctctacggaggaaatggatatgaaggtcttacagtttaagaacaagaagctggcg
gagcgcttggagcagcgacaaggatttgaagatgagcttagagaaaagatagagaaatta
gagaaacggcaggccacagacgatgctacccttctcatcgttaatcgctactggagtcgg
ctggatgagaatgtgcaggtgctgttgaagcgttatgatcaggaggcaggtttccagagc
tgtgtacctgatggccctccagaagcgaaggagagttccgtggagtcagaggctggagtg
aaggggctgccaccctcagaggggtccgatgtgaaagactcccctgagcctcccttggct
ccaccccctgctgtttccagcgttctcccagaatcctcgctgaacttcttggccacgttg
gcatgcagtaccacggaggagatcgagctgcagctgcaggagcgcatggaatttagtaag
cgagccgtgtcctgtgtggtggaaacctccaataagcttcaccgcagaatgcaggaactg
tgcgagcgcatccagagtgccgactttgaccagttggacgaaacacttcggtctctgaat
aaagacctgatcagtgagaacaacaggctccaggacttgtctactgtgctacaggagaaa
caccatcgcatctccttacagcaccacgagctgcaagacagagtcatctcctctgagacc
aaggtgtcggagatggagcgcagcattgaggatctgcagtgggacatcgagaaactgcgc
aaacacgagcagaagctgaatcgccacctggcggaggccttggagcagctgaattcagga
tatcacatttccggaagttctggaagtttccagggaggacagaccacgctgactgtgcag
aagtttgagatgctgaatgcggagctggagcagaaccaagaactggccaataaccgcatg
tgtgagctggagaagctgcagaacgagctgcaggccgctgtgcggctcaaggagaaatta
aagctggacctgagaactctccccgaggaggccgtcagaggcacacaggacttccgctgc
ctacagtctcagttttctctcctgtacaacgagtctctacaggtgaaaacgcaactggac
gaggctcgggctcttctcctcaacaccaagaacagtcacctgaggcagattgagcgcatg
gagagtgaggagttgtctgtccagaagaaactgcggaccgaggtgattcagctggaggat
actctggcccaggtccgcaaggagtatgagatgctgaggatcgagtttgaacagaatctg
gctgccaatgaacaagccggtcctattaatcgtgagatgcgtcatttaattgggagtctt
caaaaccacaaccaccagctgaagggagatgttcagcgatataagcgcaaggttcgagat
gctcaaggagaggtgagcaagatgcgtctacaggtgggtgctcccccgtgcccagcccca
agcctttccagtgccgaaatgatgaccaccacagtagtgaaagaagaagaggcagatgtg
aagaaagaacagcctggagttgtgatgcgtgacccagaaacccctactactcctgaagta
aagaaggaggaagaggaacagagaaaagagccagagcgcagtaaaacgcgagagcgagaa
atggacagggagcgagaaaaggagcgtgacagagaaaaggatcgagatcgtgaccgggac
aagcagaagacagatgacagtaaaaggaaggactccgatatcttgaaacagctgagagta
gaactcaagaaggcgcaggaaagtcagaaggagatgaaactgctgctggacatgtacaaa
tctgccccaaaggagcaaagagacaaagtacagctaatggcggccgagaggaagaccaaa
gccgaggtggaggagctgcggttacgagtgcaggctctagaagagaaagacagaagggag
aggaagaaactggctgatgaggaagcgctacggaaaataaaacttgcagaggaacaaatt
gaccatttacaaaggaagctaagcgctaccaaacaggaggaggaggcgctgctgtcggag
atggatgtgactggacaggcgtttgaggatatgcaggaacagaacattcgcttgatgcaa
caactacgagaaaaagacgacgcaaatttcaagctgatgtctgagcggataaaatccaac
cagatccacaagctgctgcgagaggagaaggaagagctggcggaccaggtgcaggggctg
aagacgcaggtggacgctcagctcttacaggtgcagaagctggaggagcgggagcggctg
ctgcacacctcgctggctgccatagagaaggagctgacgctgcggacgcaggcgctagag
atacagaagaggaaggccgttgaagcagcgcagctctcagaagacctgaaggtccagctt
gagcacattgtcagcactctgcgagacactcagagctttgtgtgtgataaccgtacagct
aaggaaaaagagtcattcagcctaaagcgagcacaggaggagatctcacgcttgcggaga
aaactagaaaaacagaagaaaatggaagtttatgcagacgctgaccaaatcttacaggaa
gagattaaagagtatcgggcccgcctcacctgtccgtgctgcaatacccggaagaaggac
gccgttctcaccaagtgttttcacgtcttctgcttcgagtgtgtgaaaacccgatatgac
tccaggcaacgtaaatgccccaagtgcaatgccgccttcggagcacacgacttccatagg
atctatatcaactag
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