Pseudophryne corroboree (corroboree frog): 134948756
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Entry
134948756 CDS
T11513
Symbol
CSTF2
Name
(RefSeq) cleavage stimulation factor subunit 2 isoform X1
KO
K14407
cleavage stimulation factor subunit 2
Organism
pcob Pseudophryne corroboree (corroboree frog)
Pathway
pcob03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pcob00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
134948756 (CSTF2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcob03019
]
134948756 (CSTF2)
Messenger RNA biogenesis [BR:
pcob03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
134948756 (CSTF2)
U7-dependent histone pre-mRNA processing factors
134948756 (CSTF2)
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Gene cluster
GFIT
Motif
Pfam:
CSTF2_hinge
RRM_1
CSTF_C
RRM_7
RRM_10
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
134948756
NCBI-ProteinID:
XP_063793027
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All DBs
Position
8:137623849..137889607
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AA seq
522 aa
AA seq
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MAGLGVRDPAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYG
FCEYQDQETALSAMRNLNGREFSGRALRVDNAASEKNKEELKSLGTGAPVIESPYGDPVS
PEDAPESISRAVASLPPEQMFELMKQMKLCVQNSPQEARNMLLQNPQLAYALLQAQVVMR
IVDPEIAVKILHRPTVVPPIIPGNQQPVQGPNVPINPQNAPVGAQPPPVVAMHVNGAPPM
MQPLPMQGGVSGPIVNPGQGPVLQGGVLQPQIGIPPGPSIPLERAQGSLQHSPVPSSGPA
PIERVSVPIPDPRAPVQRGPPNANVPPRGLLGDGPNDPRGGTLLTVTSEEQPPNRGYMPP
PLQGGPPIHHDRGPAPLQNRGGPMGEPPRPMMVESRGAPLIDPRGSPLDARGGRDPRAME
PRAMETRGPVPGPAPRGPMPGMQGPGQVGPQPPRQVPGVPASSQQGGFSPGQNQITPQDH
EKAALIMQVLQLTPDQIAMLPPEQRQSILILKEQIQKSTGAP
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atggctgggcttggtgtgcgggaccccgcggtggatagatctttaagatccgtgttcgtt
gggaacattccctatgaagctacagaggagcagctgaaagatatattttctgaagtcgga
cctgtggttagtttcaggttggtgtatgatagggaaactggaaagcccaaaggatatggc
ttctgtgagtatcaggatcaggagacagccctcagtgccatgcgcaacctaaatgggaga
gaattcagtggccgagcgctacgcgtggacaatgctgccagcgagaagaacaaggaagag
ctcaagagtctgggaacaggtgcacctgttattgagtccccgtatggtgatccagtgtct
ccagaggatgcaccagagtctataagtcgcgctgtggccagcttacctcctgagcagatg
tttgaactcatgaaacagatgaagttgtgtgtacagaacagtcctcaggaggctcgaaat
atgctgctgcagaacccacagttggcttacgccctcctgcaagctcaagtggtaatgaga
attgtggacccggagattgctgtgaaaatccttcatcgtccaactgttgtgccacccatt
atacctggaaaccagcagccagttcaaggcccaaacgttcctataaatccccagaatgcc
cctgttggtgcacagccgccccctgtggtggcaatgcatgtgaatggtgctccaccaatg
atgcaaccactccctatgcagggtggagtttctggtcccatagtgaaccccgggcaagga
cctgttctacaaggcggagtcttgcagcctcagatagggattcctcctggcccatcaatt
cctttggaaagagctcaagggagcctacagcactctcctgtgccctcttctgggcctgct
cctatagagagagtatcagttcctattcctgatcctcgcgctcctgtacagcgtggccct
ccaaatgctaatgtcccaccccgtggtcttcttggagatggacccaatgacccacgagga
ggaactctacttacagtgacaagtgaagagcaaccacctaaccgtgggtacatgccacca
cctttgcaaggtggtccacccatccaccatgatcgaggccctgcacctcttcaaaataga
ggtgggccaatgggggaaccacctcggcctatgatggttgaatccaggggtgcaccccta
atagatccacgaggatctcctttagatgcacgaggtggcagggatcccagagcaatggaa
cctcgagccatggagacaaggggccctgttcctggcccagcacccagaggacctatgcct
ggaatgcaaggaccaggccaagttggtcctcagcccccaagacaggttcccggtgttcct
gcatcttcccagcagggtggttttagtcccgggcagaaccagattaccccacaggaccat
gaaaaggctgccctaatcatgcaggttttacagttaactccagaccagattgctatgctg
ccacccgaacaaaggcagagcatccttatcttaaaggaacagattcagaaatccacagga
gcaccctga
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