Pseudophryne corroboree (corroboree frog): 134948948
Help
Entry
134948948 CDS
T11513
Symbol
THOC2
Name
(RefSeq) THO complex subunit 2 isoform X1
KO
K12879
THO complex subunit 2
Organism
pcob Pseudophryne corroboree (corroboree frog)
Pathway
pcob03013
Nucleocytoplasmic transport
pcob03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pcob00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
134948948 (THOC2)
09122 Translation
03013 Nucleocytoplasmic transport
134948948 (THOC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcob03019
]
134948948 (THOC2)
03041 Spliceosome [BR:
pcob03041
]
134948948 (THOC2)
Messenger RNA biogenesis [BR:
pcob03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
134948948 (THOC2)
Spliceosome [BR:
pcob03041
]
Complex C
Other components
EJC/TREX
134948948 (THOC2)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
134948948 (THOC2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
Motif
Other DBs
NCBI-GeneID:
134948948
NCBI-ProteinID:
XP_063793311
LinkDB
All DBs
Position
8:complement(274598170..275077436)
Genome browser
AA seq
1589 aa
AA seq
DB search
MAAAVIPADWIKNWEKSGKNDFVQLCRSLSEKGQEHVTFKEIEQILYELACQVIKGNLKQ
DQAAGVLADIIDLREDMPSILADVFCILDIETSCLEEKWRRDHFTQLVLSCLYLISDTIL
KERLDPETLESLGLIKQSQQFNQKSVKIKTKLFYKQQKFNLLREENEGYAKLIAELGQDL
SVNIRSDSILENIKSLIGCFNLDPNRVLDIILEVYQCRPDHDDFFVPLIESYMGMCEPQT
LCHILGFKFKFYQEPNGETPSSLYRVAAVLLQQNLIDLEDLYVHLLPLDSSILEEHKKEL
VEAKLIVRKLTMVVLSSEKPEEKDKEKEKDEEKNEKAPDNQKLGLLEALLKIGDWQHAQN
IMDQMPPFYATSHKPIALALCHLIHVTIEPLYRRVGVPKGAKGSRISPMHSQRAPKPVEC
FEDLRRDVFNMLCFLGPHLAHDPILLAKIVRLGKALMKESDANKLEDKDKMEVLVSCLLS
ITDQVLLPSLSLIDCNACMSEELWGMIKTFPYQYRYRLYGQWKNETYNNHPLLVKVKAQT
FDRAKYIMKRLTKENVKPSGRQIGKLSHSNPTILFDYILSQIQKYDNLITPVVDSLKYLT
SLNYDVLAYCIIEALANPEKEKMKHDDTTISSWLQSLASFCGAIFRKYPIELAGLLQYVA
NQLKAGKSFDLLILKEVVQKMAGIEITEEMTMEQLEAMTGGEQLKAEGGYFGQIRNTKKS
SQRLKDALLDHDLALPLCLLMAQQRNGVVFLEGGEKHLKLVGKLYDQCHDTLVQFGGFLA
SNLSTEDYIKRVPSIDVLCNDFHTPHDAAFFLSRPMYTHHISSKYDELKKTEKGNKQQHK
VHKYITSCEVVMAPVHEAVVSLHPSKVWDDISPQFYATFWSLTMYDLAVPTSSYNREINK
LRIQMKAIDDNIEMPPNKKKKEKERCTALQDKLVEEEKKQSEHVGRVLQRMKLEKDNWLL
ARSTKNETITKFLKLCIFPRCIFSAIDAVYCARFVELVHLQKTPNFSTLLCYDRVFSDII
YTVASCTENEASRYGRFLCCMLETVTKWHSDRAVYDKDCGSYPGFVTILRASNFDGGNKA
DQLDYENFRHVVHKWHYKLTKASVHCLETGEFTHIRNVLIVLTKILPWYPKVVNLGQALE
RRVHKICQDEKEKRPDLYALAMGYSGQLKSRKPFMVPENEFHHKDPPARNIIPPPVQNGP
GTSSQSASVLVNAAKPEESTAEDTEKLKEKSQSAQKVVTKAASTTPKVTANNGNSSANSK
VLKEKEDKDKIGKEKEKDKKEKTPAATPETKAPAKDGKDRVKEERASKDEKLRDVKEKTP
KSDKEKEKIKKEEKSQKEEKSKSVTANTESKLAAEKEKEKEPSRERDLLKESKLKESSKG
GDKTAVAGSLKSPVSRSEISESEREQKRRKIDSHSSPSHSSAVKDTLNEFKDSSTKHYIS
HTTPPISKSKEREVEKKEMDKSRERSREREKKEEKERKERKRDHSNNEREVTQETKRRKE
ENGTNASSKHSKSESPSDSPHSNEKDRNKSKSSNKEKGELVKSEKMEKSSSSSKKESRHD
KEKSEKKEKRDSAGGKEEKKHHKSSDKHR
NT seq
4770 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcagtgatacctgctgattggataaagaattgggaaaaatccggaaaaaat
gattttgtgcagctgtgtcgcagcctaagtgaaaaaggacaggaacatgtgacattcaaa
gaaatcgagcaaattctttatgagctggcttgtcaagtaattaaaggaaatctgaagcag
gatcaagctgctggagtccttgcagatattatagacctacgagaagacatgccttcaata
ttagcagatgtattttgtattttagatattgaaacaagctgtttggaagaaaaatggagg
cgggatcattttacccagctggtattatcatgtttgtatctgatatcggacactattcta
aaggagcgcctggaccctgaaacgctggaatcattggggctcattaaacagtctcagcaa
ttcaatcagaaatctgtaaaaataaagaccaaacttttttataagcaacagaaattcaat
ttattaagagaggaaaatgaaggctatgcaaagcttattgcagagctcgggcaagatctg
tctgtgaatataagaagtgattcgatcctggaaaatataaaatccctaattggatgtttt
aatctggacccaaatagagttttggatatcatcttggaagtgtaccagtgcagaccagac
catgatgacttttttgtgccgttaattgaatcttatatgggcatgtgtgagcctcagaca
ctctgccacatccttggatttaagttcaagttttaccaggaacctaatggagagacccct
tcatctttatacagagttgctgctgttctcttacaacagaatttaattgatttggaagac
ctttatgttcatcttctgccattagatagtagcattcttgaagagcacaagaaggaactt
gtggaagccaaactgattgtgagaaaattaacaatggtagttttgtcttctgaaaaacct
gaggaaaaggacaaggaaaaagaaaaggatgaggaaaaaaatgaaaaggctcctgacaac
cagaaacttggtttgctggaagcattgttgaagattggtgactggcagcatgctcaaaac
ataatggatcagatgcctccattttacgccacatctcataagcctatagccttagcactg
tgtcaccttatccacgtgacaattgagcctctgtatcgacgagtgggagtgcccaagggt
gccaagggatcccgtatttccccaatgcacagccagagggcccccaaaccagtggaatgc
ttcgaagatttaagaagagatgtcttcaacatgctttgtttcctgggcccacacttggca
catgatcccattttgctggccaaaattgtcagacttggcaaagcattgatgaaagagtct
gatgcaaataaacttgaagataaagataaaatggaggtgttggtcagttgcttgttaagc
attacagaccaggttttacttccctcattgagcttaattgactgtaatgcgtgtatgtct
gaggagctttggggaatgatcaaaacctttccataccaatacaggtatcgtctgtatgga
cagtggaaaaatgaaacttataacaatcacccattactagttaaagttaaagcacaaacc
tttgatagagccaaatatattatgaaacgtctaacaaaagaaaatgtgaagccatcagga
cggcaaataggaaaactaagccatagcaatccaacaattttgtttgattatatactttcg
cagatacagaagtatgacaacttaataacacctgttgtagattcattaaaatacctcact
tcactgaactatgatgtccttgcatactgtataattgaagcacttgcaaatccagagaag
gagaagatgaagcatgatgacaccacgatctccagctggttgcagagcttggcaagcttt
tgtggagcaatttttagaaaatatcccatagaattggctggtcttctgcagtatgtagca
aatcaactaaaagctggtaaaagctttgatttacttattctaaaagaggttgtacaaaag
atggcaggtattgaaattacagaggaaatgacaatggagcagcttgaagctatgactggt
ggcgagcaacttaaagctgagggtggttattttggtcaaattagaaatacaaagaaatct
tctcagaggctaaaagatgctttattggaccatgacttggctcttccgttgtgcttgcta
atggcccagcagaggaatggtgtggtatttctggaaggaggagagaagcatttgaagctt
gtggggaagctctatgatcagtgtcacgatactctagttcagtttggtggatttttggca
tctaatttgagcacagaggattacataaaacgcgttccttcaatagatgttctgtgcaat
gactttcacacccctcatgatgctgccttcttcctgtcaagacctatgtacactcatcac
atatcatccaaatatgatgagctgaagaagactgagaaaggaaacaaacagcagcataag
gtgcacaagtatattacatcatgtgaagttgttatggctcctgtccatgaagccgtggtc
tccttgcacccttcaaaagtgtgggatgatatcagccctcagttctacgctacattctgg
tctctgacaatgtatgatcttgctgtcccaacctccagctacaacagggaaattaataaa
ctgaggatacagatgaaagccattgatgacaatattgaaatgccaccaaacaaaaagaaa
aaagaaaaagagaggtgcacagctctacaagacaaactggtggaagaggagaagaagcag
tctgaacatgtagggagagttctgcagagaatgaaactagaaaaggacaactggctctta
gcccgatcgacaaaaaatgagaccatcaccaaatttttgaaactttgcatatttcctcgc
tgtatattctcagcaattgatgctgtatactgcgctcggtttgtagagcttgtacacctg
cagaaaacccctaacttctctacccttttgtgttatgatagagtcttttcagacatcatt
tacacagtggccagttgcacagaaaacgaagccagccgatatggcaggttcctttgctgt
atgctggagacggttactaagtggcacagtgatcgagcagtatatgacaaggattgtggt
agttatccaggttttgtaacaatattaagggcatccaattttgatggaggaaataaagct
gaccaattggattatgagaatttccggcacgtggtacacaagtggcactataagttaacc
aaggcatcggttcattgtcttgaaacgggagaattcactcacatcaggaatgttcttatt
gttctgaccaaaatcttaccttggtatcccaaagtcgtgaacttgggacaagctttggag
cgcagagtacacaaaatttgtcaagatgagaaggaaaaaagacctgatctatatgcattg
gccatgggctattctggacagttgaaaagcaggaaacctttcatggtgcctgagaatgag
tttcatcacaaagacccccctgccagaaacatcattccacctccagtacagaatggacca
ggcacttccagtcagtctgcatcagtcttggtgaatgcagctaaacccgaagaaagcact
gctgaggatactgaaaaattaaaggagaaatctcagagtgctcaaaaagttgttacaaaa
gctgcaagcacaacaccaaaggttactgcaaataatggaaacagctctgcaaacagcaaa
gttttaaaagaaaaagaagacaaagataaaattgggaaagaaaaggagaaagataagaag
gaaaagactccagcagcaacaccagagacgaaggcaccagcaaaggatggaaaagataga
gtaaaggaagaacgggcaagcaaagatgaaaagctgagagatgttaaggagaaaacacca
aaatctgacaaagagaaggaaaaaatcaaaaaagaagaaaagtctcagaaggaagaaaaa
tccaagtctgttacagcgaataccgaatcaaaactggctgcagagaaggaaaaagagaag
gagccctcaagagagagagatctgttgaaggaatctaaattgaaggaaagctctaaagga
ggcgataagacagctgtggctgggtccttgaagtcccctgtttcccgatccgagatatcc
gagtctgaaagggaacaaaaacgacgtaaaattgatagtcattcttctccgtcacattcc
tcagcagtaaaggacaccctcaatgaatttaaggactcttcaacaaagcactacattagc
cacactaccccaccaatatccaagagcaaagagagagaggtagaaaagaaagaaatggac
aagtcaagagagcgttcacgggaaagagaaaaaaaagaggaaaaagaaagaaaagagagg
aaaagggatcactctaacaatgaacgtgaagtgacccaagagactaaaaggcgtaaagag
gaaaatggaacaaatgcttcctcaaaacacagtaaaagtgaaagtccatcagattcccca
cactcaaatgagaaagaccgaaacaaatcaaagtcttcaaataaagaaaaaggggagctt
gtgaaatcagagaagatggagaaaagttcttccagcagcaagaaggaatccagacacgac
aaagaaaaatctgagaagaaggaaaaacgagatagtgcaggaggaaaagaggagaaaaag
caccataaatcttcagacaagcacagataa
DBGET
integrated database retrieval system
