Pseudophryne corroboree (corroboree frog): 134948966
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Entry
134948966 CDS
T11513
Symbol
ATG4A
Name
(RefSeq) cysteine protease ATG4A isoform X1
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
pcob Pseudophryne corroboree (corroboree frog)
Pathway
pcob04136
Autophagy - other
pcob04140
Autophagy - animal
pcob04145
Phagocytosis
Brite
KEGG Orthology (KO) [BR:
pcob00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
134948966 (ATG4A)
04140 Autophagy - animal
134948966 (ATG4A)
04136 Autophagy - other
134948966 (ATG4A)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pcob01002
]
134948966 (ATG4A)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pcob04131
]
134948966 (ATG4A)
03029 Mitochondrial biogenesis [BR:
pcob03029
]
134948966 (ATG4A)
Peptidases and inhibitors [BR:
pcob01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
134948966 (ATG4A)
Membrane trafficking [BR:
pcob04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
134948966 (ATG4A)
Mitochondrial biogenesis [BR:
pcob03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
134948966 (ATG4A)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_C54
ATG4_LIR
Motif
Other DBs
NCBI-GeneID:
134948966
NCBI-ProteinID:
XP_063793349
LinkDB
All DBs
Position
8:287769404..287876556
Genome browser
AA seq
404 aa
AA seq
DB search
MEAGFLTYENQNVPSDYFELEELEELPDTDEPVYILGRQYDIKTEKCDLLSDVTSRLWFT
YRKKFSPIGGTGPSSDTGWGCMLRCGQMMLAQALICQHLGREWRWETDIKQPEEYYQILQ
CFLDRKNSCYSIHQMAQMGVGEGKSIGEWYGPNTVAQVLKKLALFDEWNSLAVYVSMDNT
VVIEDIRKMCRYPSYSWNVVHDGSYTHQSSWSRCRDTSEQCSTWKPLLLIVPLRLGINQI
NPVYIDAFKECFKMPQTLGALGGKPNHAYYFIGFSGDELIYLDPHTTQTFVDTEEAGTMQ
DQTYHCQKNPNRMKILNLDPSVALGFFCKEEAEFDKWCSTVEKVSAEILKQQSLRMFELV
PKHPPHWPPFIPPTKPEVTTTGAELIESTDKLFDMEEEFEILTV
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atggaggccggttttttaacctatgaaaatcagaatgttccatcagattactttgaactt
gaagaacttgaagaactgccagacacagatgagccagtttacattctaggaagacaatat
gacattaaaacagagaaatgtgatttgctgtctgatgttacctcccgcctgtggtttaca
tacagaaagaaattttctcctattggaggaactggtccctcctctgatactggctggggg
tgtatgctgaggtgcggacaaatgatgctggctcaggccttaatctgccagcatttaggc
agggaatggcgatgggaaacagacatcaaacagccagaagaatattaccaaattctacag
tgttttctggacagaaaaaacagttgttattctattcaccagatggcacagatgggtgta
ggagaaggaaagtctataggagagtggtatggaccaaatactgtggctcaggttttaaag
aaacttgctttatttgatgagtggaattcattagctgtttatgtttcaatggataacaca
gtcgtcattgaggatataaggaaaatgtgccgctatccttcttacagctggaatgtggtg
catgatggatcttacacacaccaaagttcttggagcagatgcagagacacatcagagcag
tgctcaacgtggaagccgcttctgctcatagttcctctccgtctaggaataaaccagatt
aatcctgtttatattgacgctttcaaggaatgttttaagatgccacagacattaggagct
ttaggtggaaaaccaaatcatgcctattatttcataggtttttcaggggatgagctcatt
tacctggatcctcacacaacacagacctttgtagacacagaggaagccggcacaatgcag
gaccagacttatcactgccaaaaaaatcccaacaggatgaagatcttaaatctggacccc
tctgtggcattaggattcttttgcaaggaagaagcagagtttgataaatggtgtagtaca
gtagaaaaggtaagtgctgaaatattgaagcaacagagtttgcggatgtttgaactggta
ccaaagcaccctcctcactggcctcctttcataccgccaacgaaaccagaggttaccact
acaggcgcagaactcattgaatctactgataaactgtttgatatggaagaagagtttgaa
atccttaccgtgtga
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