Pseudophryne corroboree (corroboree frog): 134949185
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Entry
134949185 CDS
T11513
Name
(RefSeq) leucine-rich repeat and fibronectin type III domain-containing protein 1-like protein isoform X1
KO
K16356
leucine-rich repeat and fibronectin type-III domain-containing protein 3
Organism
pcob Pseudophryne corroboree (corroboree frog)
Brite
KEGG Orthology (KO) [BR:
pcob00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pcob04515
]
134949185
04990 Domain-containing proteins not elsewhere classified [BR:
pcob04990
]
134949185
Cell adhesion molecules [BR:
pcob04515
]
Immunoglobulin superfamily
SALM family
134949185
Domain-containing proteins not elsewhere classified [BR:
pcob04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
134949185
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
I-set
Ig_3
LRR_4
LRR_5
Ig_2
fn3
ig
LRR_9
FN3_DSCAM-DSCAML_C
C2-set_2
C2-set_3
Fndc10
Motif
Other DBs
NCBI-GeneID:
134949185
NCBI-ProteinID:
XP_063793693
LinkDB
All DBs
Position
8:complement(379477790..380412157)
Genome browser
AA seq
706 aa
AA seq
DB search
MRLRLFCVFRCTIGRSPRFGLGVSLRFARHRLLFQIVCDMDPGAYGKGPLHEVKLDATLT
AWHGPCLNVVHLTMERLAIYLLIISTSVKAMMMCPKRCSCQNVNPSFTILCTKTGLLFVP
PTIDRRTAELRLMDNFITTLRRKDFANMTDLIHLTLSRNTISQVMPYAFYDLKGLHALHL
DSNRLTFVNEDHFKGLINLRHLILSNNQLHYIAPGSFDDFIDTLEDLDLSYNNLIEIPWE
TIGRLSSVNTVGLDHNLIEYVPEGIFSNLHKLARLDMTSNKLKKIPPDPLFSRIPVYAKT
KGSPLTSLVLSFGGNPLHCNCELVWLRRLTREDDLETCASPVELMGKYFWSIKEEEFVCE
PPMITHRTSKQEVMEGKGVSLKCKAVGDPDPYVRWIAPDGKLVSNTTRTISYENGTLDIF
ATRFTERGNFTCIASNAAGETTAHVELVVHQFPNLANSTSYDKETESGLSDILTPAKSST
PSNETKSLQDRKVVVVELTSSSALIQWPPQSHIPGIRMYQIQYNSSLDDILIYRMIPSSS
KSFFLSDLVSSRQYDLCVLAVYDDGITSLTATRVIGCVQFTTEQEYKQCRSLHAQFLGGT
MIIIIGGIIVASVLVFIFILLMKYKVYNNHPKTKPAKVTNVCSQTNGSQSGTMGRISSKL
SERRDSIMQDISGTSIRGKTMVDLTPDGDKQTVSDTTFITNDVLSH
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atgcgtttgaggttattttgtgtttttcgatgcaccattggacgctcgccacgcttcggg
ctcggtgtctcgctccgcttcgctcgccacaggttactattccaaatagtttgtgacatg
gacccaggggcttatgggaaaggtcctctccacgaagtgaaactagatgctaccctgaca
gcatggcatggcccctgtcttaatgttgtacacctgaccatggaaaggctggccatttat
ctgttgattataagcacatctgttaaggccatgatgatgtgccccaagagatgctcctgt
cagaatgtcaatccgtccttcaccatcctctgtaccaagaccggccttctatttgtgccc
cccactattgacaggaggacagcggagctcaggctcatggacaatttcataaccaccctt
cgaaggaaagattttgctaacatgacggacctcatccatctaactctgtccagaaatacc
atcagtcaagtcatgccttatgcattctatgacttaaaaggactccacgccttgcatttg
gacagcaaccggttaacatttgttaatgaagaccattttaagggtttaattaacctccga
catttgatcttgagcaacaaccagctacactacatagctccgggatcgtttgacgacttc
attgacacgttggaagatttagatttgtcctacaacaatctgattgaaataccatgggag
actattgggaggctttcaagtgttaatacagtgggtctggatcacaatctcattgaatat
gttcctgagggaatcttctccaaccttcataaattggctagattggatatgacctccaac
aaactaaaaaagatcccaccagacccattattttctaggatccctgtttatgccaaaact
aaaggttcccccttaacatctctggtgcttagctttggtgggaatcctctacactgcaac
tgtgaattggtgtggcttaggaggctcaccagggaggatgatctagaaacctgtgcctca
cctgtagaactgatgggcaaatatttctggtctataaaggaagaggaatttgtgtgcgaa
ccacccatgataactcaccgaacttccaaacaagaggtaatggaaggtaaaggagtctcc
ctaaagtgcaaagcggtgggtgatcctgacccgtacgtacgatggatcgctccagatggg
aagctagtctctaatacaactagaactatatcatatgagaatggaactttggatattttt
gctactcggtttacggaacgtggcaattttacctgcattgcttctaatgcagcgggggaa
actacggcacatgtggaacttgtagtacaccaattccctaatcttgctaacagcaccagc
tatgacaaggaaacggagtcaggcctttctgatatactgacgccagccaagtctagcaca
ccatccaatgaaactaaatctctgcaggataggaaggttgtggttgtagagttaacctca
tcctcggctctcatccaatggcctccccagagtcacatcccaggaataaggatgtaccag
attcagtacaacagctctttagatgacatccttatttacagaatgatcccatcatctagc
aaatcattcttcctaagtgacctggtgtcatcccgtcagtatgacttgtgcgtcctggcc
gtgtacgacgacgggataacctctttaacggccaccagagtaattggatgtgtacagttt
acaacggagcaggaatataagcagtgcagatcactccatgctcagtttcttggtgggacg
atgataatcattattggcggcatcatcgtggcttccgttctggtcttcatttttattctg
ctgatgaagtataaagtctacaataaccacccaaaaacgaaacctgctaaggtcaccaac
gtgtgctctcagaccaatggcagccagagtggcacgatgggacgtatttcttctaaactg
agtgagaggagagacagtatcatgcaggacatctcaggaacgtccatcagaggcaaaacc
atggttgacctcaccccggacggtgacaaacagactgtttctgacactacctttataaca
aatgacgtcctgtctcactag
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