Pseudophryne corroboree (corroboree frog): 134949221
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Entry
134949221 CDS
T11513
Symbol
SPTBN4
Name
(RefSeq) spectrin beta chain, non-erythrocytic 4
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
pcob Pseudophryne corroboree (corroboree frog)
Pathway
pcob04517
IgSF CAM signaling
pcob04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pcob00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
134949221 (SPTBN4)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
134949221 (SPTBN4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pcob04812
]
134949221 (SPTBN4)
Cytoskeleton proteins [BR:
pcob04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
134949221 (SPTBN4)
Intermediate filaments
Intermediate filament-binding proteins
134949221 (SPTBN4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
SOS1_NGEF_PH
PH_17
Motif
Other DBs
NCBI-GeneID:
134949221
NCBI-ProteinID:
XP_063793756
LinkDB
All DBs
Position
8:complement(387862778..388194155)
Genome browser
AA seq
2547 aa
AA seq
DB search
MANVSPELDNMEVQTPPNNNNRWDQTDHAWDEPAASGKFFECSRIKALADERDAVQKKTF
TKWMNSHLSKVPCRVNDLYSDLRDGYIITKLLEVLSGEQLPKPTRGRMRIHSLENVDKAL
QFLKEQRVHLENVGSHDIVDGNHRLTLGLVWTIILRFQIQVIKIETEDNRETRSAKDALL
LWCQMKTAGYPEVNIQNFTTSWRDGLAFSALIHRHRPDTIDFNKLTKSNAAYNLQQAFNT
AEQQLGLIKLLDPEDVNMENPDEKSIITYVVSFYHYFSKMKALAVEGKRIGKVLDQAIET
EKDINRYEDLASELLDWIERTISIITNQKFANSLLGVQQQLQAFTTYCTTEKPCKFQEKG
NLEVLLFTIQSKMREEKRKLYIPTEGNNISDINKAWTRLEKAEHEREVALRNELIRQEKL
ELLSQRFDQKAAMREAWLSENQRLVSQDNFGYDLSAVEAAMKKHEAIEADISSYEERIQV
VADLAQEMESEGYYDICRITAQKDNILRQWNLLKDLLRSRRGRLEKNLALQKIFQEMVYM
IDWMDEMQVPLSSKDFGKHLLEVEDLLQKHSLLEADITAQTERVHSLNQAALKFTQYSEY
QPCDPQIICNRVEHVKSCLEALRQLAEKRRGELEESRHLWCLLQEVEEAEGWIREKEQIL
SAPQSYGKDLSSVLRLLSKHKILVGELGGRYSMLQQTLQKGEQVLTKRRRGMSGLRQRMQ
EVKLKWENLEKASNAHQLKLQEASNFHQFNADTVELAGWLQDTYRLVSSDDFGHDEFSTQ
SLVKKHRAATEEIEKHRAAVLGLRKQLSELGADYRDQVDVQISIVEVEQLYGEVVEVASL
RSQWLQDALDVYKMFGEVNSCEVWIDEKEQWLMKMDIPQRLEDVEVVQHRFESLDQEMNS
LMGRVLDVNQIVQQLLEGGHPSSSEVRACQDHLNSRWNRIVELVEQRKEQITSVLRLQNY
FLECNEVKSQIREKRKAMETTQCGSGELGGVLTLQRKLSSMEAALVALEPKLVQLQQDAE
ALTTCHPSQAMEVLVHFEEISGEWEALKRTIQGCEDSLTVANKLQQFIQDLDNFLTWLVK
TQTAVAAEELPSNLLEAERLLGLHGALKEEISRYEEDYNKIQAVSDLLSLEEADLPYLSL
QQWLQKLEVGWNKLLQMWENRREVLVQSHIFHLFLRDVKQADACLNNQESALAHVELPNT
MQGVEIAIKKHKDFLTTMEMNTQKVSLAVDAGESLIRLGNVFADRVQDRIVGIQKRSQRN
MALAQKWLQRLKDHLQLQHFLQDCNELDAWICEKTLMARDNSRDGSQKLHKKWLKHQAFT
AELSQNKGWLDKIEKEGHQLIQEKPELAGVVKKKLEEIRQCWVELESSTQAKAQQLFQAN
KADLVVQNYTDIGKRLYRLEEQLQPVEPLPDITVVNDQLKKLETMESQMEEWYKEVGVLQ
AQMASLPLDVVSQEAVSEKQNEVGTRIVRLIEPLKERRRILLASKEVHQVTRDLEDEISW
VQERLPLAMTKEHGSSLQSVQQLIKKTQNLRREIQVHSPRVDDILERAGTIAGIRSPEAE
GVRMGYESLREMWNMLREETERRQQILDINYQVQQYYFDVGEVETWLSEQELVMMNNDKG
KDEQSTLQLLKKHLMVEQTIENYEETIAQLSRQCRTLLDLAHPDSEQISRRQSQIDRLYV
SLKDLVEERKGRLEQQYWLFQLSREVDELEQWIAEKEVVAGSPELGQDYEHVTLLQEKFT
EFVSETGSIGHERISAVNQMVDELIDYGHSDAATIAEWKDGVNEAWADLLELMETRAQML
SASHELHKFFNDCKEVLSQVEEKKQRVPEVKAQEVRLSAGSLQRILSSFEHDIQVLVTQV
RQLQENAAQLRTVYAGENAAAIVTSEQEVMRSWKELLTSCEDCRLQITSTSDRMKFLGLV
RDLISWMDSIICQIGTGEKPRDVSSVEVSISYHQGLKSEIEARNKRIADCVELGKSLVLN
KRPASEEIKQSLDRLMAKKRELLDKWQKHWEWLQQMLEVHQFAQEAGVAEAWLTAQEPIV
KSPELGNSVDEVEQLIRRHEAFRKTAAVWEERFSSLRRLTTLEKMKAEQNKQPATPLLGR
KVFSDTTDFSTRPSPFVHQAIHEKSESRSEQKDTLSIPNGVQLDSHRIRGEKGDTRVGYV
RQEMKPERLQPKIDHVEARVTEKLLPAQEGSRAERSEIKVAQGMATLTVDKTDSKLSRHA
ARRERHDRRLERQESSEHEVAKPEQPEEKRRKDRHEKRLERQGSSEQETPKQEQPERRRD
RHERRADKQESIEQEAPRNEPEPKPGGKATLADIVEQLQEKEALQNNPESRDSPARLPNG
VEKLQERTTRPDRPRARDRPKPRRRPRPKDPNQPPGEARRSRSAPAQSNAPPPPPPTHTV
QQEGYLFRKHELDGPSKKASNRSWVNLYCVLNKGDLGVYKDAKSQSSGATHGGEPLLNLN
RASCEVANEYKKKKFVFKLRSTDGREFLFQAKDEEEMKNWITAIGTSVSEHAEIAKWSQT
LVTTSSTDEGNIKRESDRRSSAGGRKK
NT seq
7644 nt
NT seq
+upstream
nt +downstream
nt
atggcgaatgtgagcccagagctggacaacatggaggtgcagacgcccccaaacaacaac
aatcgctgggatcagactgaccatgcatgggatgagcccgcagcctctggcaaatttttc
gagtgctcccggatcaaagctctggctgatgaacgtgatgctgttcagaagaaaaccttc
accaagtggatgaactcccacctctccaaagtgccgtgccgcgtgaatgacctttacagc
gacctgcgcgatggctacatcattaccaaattgctggaggtgctatccggagagcagctg
cctaaacccaccagaggccggatgagaatccactctctggagaatgtggacaaggccctc
cagtttctcaaggagcagcgtgtgcatctagaaaacgtgggctcacatgatatagtagat
ggaaatcatcgactgaccctgggcctcgtctggaccattatcctccgtttccagatccaa
gtaataaagatagaaactgaggacaatcgtgagaccaggtcggcaaaggacgccctcctc
ttgtggtgccagatgaagactgcaggttatccagaggtcaatatccagaactttaccaca
agctggagagatggcctggcattcagtgcgctgatccacaggcacaggccggataccatt
gacttcaacaagctgactaagtccaatgcagcgtacaatctccagcaagcctttaataca
gctgagcaacagctgggtctgatcaaactgctggaccctgaagatgtcaacatggagaat
ccagatgagaagtctattatcacatatgttgtgtctttttatcactacttctccaagatg
aaggctttggcagtggagggcaagcgcatcggaaaggtgctagaccaggccattgagact
gagaaggacattaacagatacgaggacttagcatcagaacttctggactggattgaaaga
accatatcaatcatcactaaccagaaattcgccaattccttactgggcgtccagcagcag
ctccaggcgttcaccacctactgcaccactgagaaaccctgcaagtttcaggagaaaggg
aatttggaggttcttctcttcaccattcagagcaagatgagggaagagaaacgcaaactg
tatatccctacagaggggaataatatctctgatattaacaaggcttggacgcggctggag
aaggctgaacatgagcgggaggttgccctgcgcaatgagctcatccgtcaagagaagctg
gagctgctttcccaaagatttgatcagaaagcagccatgagagaggcttggctcagcgag
aaccagcgcctggtgtcccaggataattttggttacgacctatcggcagtggaggccgcc
atgaagaaacatgaggccattgaggcggacatctcttcctatgaggagcggatccaggtg
gtggctgacctggcccaggagatggagtcggagggatattatgatatctgcaggataaca
gcccagaaagataacatcctaaggcagtggaacctcctgaaagatctgcttcgctccaga
agagggaggctggagaagaacctggccctccagaagatattccaggaaatggtgtacatg
atagactggatggatgagatgcaggttcccctttcgtccaaagactttgggaagcatctt
ttggaagtagaagatcttctgcagaagcacagcttgctagaggccgacatcactgcccag
actgagagagtccactccctaaatcaggctgccctgaagttcactcagtactctgaatat
cagccctgcgacccccagatcatctgcaacagagtagagcatgtcaagagctgtttggaa
gcactgaggcagctggcggagaaacgccggggtgagctggaagaatcaaggcatctctgg
tgccttctgcaggaggtggaagaggctgagggctggatccgagagaaagaacagattctg
tctgctccacaaagttacgggaaggacctgagcagcgtcctgaggcttctgagcaaacac
aagatactggtgggggagctcggagggagatattctatgctacagcagactctccagaaa
ggggagcaggtgctaacaaagaggcggcgaggaatgtctgggcttcgccagaggatgcaa
gaggtgaagctgaaatgggagaacctggaaaaggcctccaatgcccatcagctgaaactt
caggaggcctctaatttccatcagttcaatgcagacactgtggagcttgcaggttggctg
caggatacctatcgcctggtttccagtgatgactttggacacgatgagttttccacccag
tcgttggtcaagaagcatcgggcagccaccgaagagatagagaaacacagagccgctgtg
cttggcttgaggaaacagttgtcggaactgggtgcagattatagagaccaggtggatgtg
cagatcagtattgtggaggtggagcagctctatggagaggtggttgaggtagcctccctg
cggagccagtggcttcaagatgcattagatgtctacaaaatgtttggggaggttaactcc
tgtgaggtgtggatagacgagaaggagcagtggttaatgaagatggatatcccacagaga
ctggaggatgtggaggttgtccagcacaggtttgagagtctggaccaagaaatgaacagt
ctgatgggtcgtgtactggatgtcaaccagattgtgcagcagcttctagagggtggccat
cccagctcctctgaggtccgggcctgtcaggatcacctaaacagcaggtggaaccgaatt
gtagagctagttgagcagaggaaagaacaaatcacctctgtccttcgcctgcagaactat
ttcctagagtgcaatgaggtaaagtcacagatccgtgagaaaaggaaagccatggagacc
acccagtgtggtagtggagaactgggtggggtgttgactctgcagaggaagctgtcaagc
atggaggcagcactggtggctcttgagcccaagttggtccagctgcagcaagatgcagaa
gcccttaccacctgccacccatctcaggccatggaagtgctggtacactttgaggaaatt
agcggagagtgggaagctctgaagaggactatacaagggtgtgaggattccctcacagtt
gccaacaagttacagcaatttattcaagacctggataactttctgacttggttggtcaag
acacaaactgctgtggctgctgaagagttgccgtccaacctgttggaggctgagaggttg
ctagggctccacggtgccctgaaagaagagataagcagatatgaggaggactacaataag
attcaggcagtcagtgacctcctgagcctggaagaggctgatctcccatacctttctctc
cagcagtggttgcagaagctggaggtaggatggaataagctgctgcagatgtgggagaac
aggagggaggtccttgtacagtcccacattttccatttattcttgagagatgttaaacag
gctgacgcgtgcctgaacaaccaggagtcagctttggctcacgttgagttgcctaacact
atgcaaggggtggagatagccattaagaagcataaggattttctgactactatggaaatg
aacacacagaaggtttcattggccgtggatgctggggagagcttgatacgacttggaaat
gtatttgcagatcgtgtccaggataggattgttggaatccagaagaggagtcagcgtaac
atggccctggcccagaaatggctgcagagactgaaagatcatctacagctgcaacacttc
cttcaggactgcaatgagttggatgcctggatctgtgagaaaacactgatggctcgggac
aactcgcgggacgggtctcaaaaactccacaagaaatggctcaagcaccaggcgtttacg
gctgaactctctcagaacaagggctggctggacaaaattgaaaaggaaggtcaccaactc
atccaagaaaagccagagttggccggtgtggtgaagaagaagcttgaagagatccgtcag
tgttgggtggagctcgaatccagtactcaagccaaagcccagcaactcttccaggccaat
aaggccgacctggtggtgcaaaattatacagacattggaaagagactctataggctggaa
gagcaacttcagccagtggaacccttacctgacattaccgtggtcaatgatcagctcaaa
aagctagagacaatggagtctcagatggaggaatggtacaaggaggtgggggtgctgcag
gcacagatggcgtctctcccgctggatgtggtgagccaagaggctgtgagcgagaagcag
aatgaggttggcactaggatcgtgcgactgatcgagcccctgaaagaaagaagacggatt
cttctggcctccaaagaagttcatcaagtcacccgggacctggaagatgaaatttcctgg
gtacaggagaggcttcctctcgctatgactaaagaacacgggagcagcttacagtccgtg
cagcagctcatcaagaaaacccagaacctgaggcgagagatccaggtacactccccgcga
gtggatgacatcttggagcgagcggggaccattgctggtatccgaagtccggaggcagag
ggcgtacgtatggggtatgagagcctacgggagatgtggaatatgctgcgggaggagaca
gagagaaggcagcagatcttggatatcaactaccaggtgcagcaatattactttgatgtg
ggcgaggtggagacgtggctgagtgagcaggaactcgtcatgatgaacaacgacaagggg
aaggatgagcagagcaccctgcaactcctaaagaagcaccttatggtggaacagaccatt
gagaactacgaggagacaatcgctcaactgtcccggcagtgccgcaccctactagacctg
gcacaccccgacagtgagcagataagtaggcgtcagtctcagattgatcggctctacgtg
tctctgaaggacttggtggaggagcggaagggacgcctggagcagcagtattggctcttc
cagctaagccgggaggtggatgaactggagcagtggatagcagagaaggaggtggtggcc
gggtctccagagctgggccaagattatgagcatgtgacacttctccaggagaagttcacg
gagtttgtcagtgagaccggcagcattggacatgagcgcatctctgcagtcaaccagatg
gtggacgagctcattgactacggacactccgatgcagccacgatcgcagaatggaaggac
ggagtgaatgaggcctgggcagacttgctggagttgatggagacaagggcccagatgctt
tctgcctcccatgagctacataaattcttcaacgactgcaaagaggttctgtcccaggtg
gaggagaagaagcagagggtgccggaggtgaaggcacaggaggtccggctctcggctggg
tccttgcagcggattcttagttcttttgaacacgacattcaggtccttgtcactcaggta
cgccagctgcaggagaacgctgcccagctgcgcacggtctatgccggggagaatgcagca
gccattgtcaccagtgagcaggaagtaatgcgctcgtggaaggaactgctgacctcatgc
gaggactgccgcctgcagattaccagcaccagtgaccgcatgaagttcctaggtctcgtc
agggacctgatctcctggatggacagcatcatctgtcagattggcacaggagagaagccc
agagacgtgtcttctgtggaagtttcaataagttatcatcaaggtttaaagagtgaaatt
gaggcacgaaacaagaggattgcggactgtgtggagctgggaaagtctttagtcctaaac
aagcggccggcatcagaagagatcaagcagagtctggacaggttgatggcaaagaagaga
gaactgttggataagtggcagaagcactgggagtggctgcagcaaatgcttgaagttcac
cagtttgcccaagaagctggagtggctgaagcctggctaactgcccaggagcccatagta
aagagcccggagctgggcaatagcgtggacgaggtggagcagctaatccgacgacatgag
gccttccgcaaaacagcagccgtctgggaggaaagattcagctcattgaggcgcctaact
acattggagaagatgaaagcagagcagaacaagcagcctgcaaccccactgctcggccga
aaagttttctcggacactacggacttttcaactcgtccatcaccctttgtacatcaggca
atccatgaaaagtcagagtctagatcagagcagaaagatactttgtccatccctaacggg
gtccagctggacagccatagaataagaggagaaaagggtgacacaagagtgggttatgta
cggcaggagatgaagccagaacgtctgcaaccaaagatagaccatgtggaagccagggtg
acagagaaactgctgccagctcaggaaggatcccgggcagagagatcagaaattaaagtg
gcacagggtatggcaaccttgactgtagataaaacggatagtaaattgagtcggcatgct
gcgcggagagagcgccatgatcggagactggaacgccaggagtccagtgaacatgaggtt
gccaaaccagagcaaccagaggaaaagaggaggaaggataggcatgagaagaggttggaa
agacaaggatctagtgagcaagaaactccaaaacaggagcagccggaaaggaggagggac
aggcatgagagaagggctgacaaacaagagtccatcgagcaagaagcaccaaggaatgaa
ccggagcccaaaccaggagggaaggcaacacttgcggacattgtagaacagctgcaggag
aaagaagcattgcagaacaaccctgaaagtcgcgactctcctgcacgattacccaatggt
gtggaaaaacttcaagaaagaacgacaagacctgaccggccaagagcacgagacagaccc
aagccaaggagaagacctcgacccaaagacccaaaccaaccaccgggtgaggcaaggaga
tcccgctcagctccagcacagagcaatgcacctcctcccccacctcccacccatacagta
cagcaggaaggatacctattcaggaaacatgagctggatggtcccagcaaaaaggcctca
aacaggtcctgggtaaacctgtactgtgtgctaaataaaggggacttaggggtctataag
gacgcaaagagccagagttcaggggctacacacggaggggaacccctgctgaatctcaac
agagcttcctgcgaggtggccaatgagtacaagaaaaagaagtttgtcttcaagctcagg
tcgacagatggaagagaattcctctttcaagcaaaagatgaggaggagatgaagaactgg
attactgctataggcaccagtgtttctgaacatgccgagatagccaaatggagccagacc
ctcgtcactacctcctctacagatgaaggcaacataaaacgagagtctgatcgcagatcc
agtgcggggggccgtaagaagtga
DBGET
integrated database retrieval system
