Pseudophryne corroboree (corroboree frog): 134957478
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Entry
134957478 CDS
T11513
Symbol
PTCH2
Name
(RefSeq) protein patched homolog 2 isoform X1
KO
K11101
patched 2
Organism
pcob Pseudophryne corroboree (corroboree frog)
Pathway
pcob04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
pcob00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
134957478 (PTCH2)
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Motif
Pfam:
Sterol-sensing
TRA2_N
Patched
FMP33
MMPL
Motif
Other DBs
NCBI-GeneID:
134957478
NCBI-ProteinID:
XP_063795511
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All DBs
Position
9:61827019..61917956
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AA seq
1421 aa
AA seq
DB search
MASDPPSTDLPPGYKTSHPAPSSDLLRRPSYCHAAFALKQIAKGKAVGQKAPLWLRAQFQ
ALLFSLGCSIQRHCGKVLFVGLLVFGAMAVGLRVASIETDIERLWVEAGSRVSQELRYTK
DKLGEESIYTSQMLIQTPKKEGENILTQEDMLLHLTAALAASKVQVSMYGKSWDLNKICY
KSGVPIIENGMIERMIEKLFPCVIITPLDCFWEGSQLQGGSAYLPGRRDIQWTNLDPLQL
MEELGQFTSLDGFKEMLDKAEVGQAYMERPCLDPTDSECPESAPNKKSQKTPDIVSTLRE
GCYGFSKKFMYWQKELILGGMTKGLEGELKSAEALQTMYLLMSPGQLYEHFKDDYEIHDI
NWNEEKAAAILESWQRKFVEQAQQSIFQNASQDIHAFSTTTLNDIMKSFSDVSAIRVAGG
YLLMLAYACVTMLRWDCSKSQGAVGLAGVLLVALSVASGLGLCSLLGLSFNAATTQVLPF
LALGIGVDDMFLLAHAFTETSLSTPLKERTGECLRRTGTSVALTSINNMIAFFMAALVPI
PALRAFSLQAAVVVVFNFAMVLLIFPAILSLDLQRREDQRLDILCCFYSPCSSRVIQIQP
QEMPDANDNHTYHPSPYGNPTITTSTQITTTVQAFTQCDPSGHHIVTILPPTSQISTSPS
VIVPTVDPLGSQVFTPSTSTRDLLAQMDESKVGRECVPLPFLKWSLSDFAREKYAPLLLK
PETKGIVVALFMALLGLGLYGTTMVHDGLYLTDIVPRETKEYNFIAAQFKYFSFYNMFIV
TKGGFDYPKSQASLYDLHESFSSVKYVVREEGRELPKMWLHYFQDWLRGLQLAFDRDWES
GSITQDNYRNGTEDGVLAYKLLIQTGNKKDPFNLNHLISRRLVDENGLIPQDAFYIYLTV
WVSNDPLGYAASQANFYPQPPEWIHDRYDTTGENLRIPAAEPIEFAQFPFYLNGLRQTSD
FIEAIESVRSVCEEFIKQGVYSYPSGYPFLFWEQYIGLRHWFLLAISIVLACTFLVCAIL
LLNPWTAGIIVFILAMMTVELFGIMGLIGIKLSAIPVVILIASVGIGVEFTVHVALGFLT
AIGDRNQRSVLALEHMFAPVLDGAISTLLGVLMLAGSEFDFILRYFFAVLTILTILGLLN
GLVLLPVLLSLIGPPAEVTPADNGNCLPASTLESLPPHLSHHTFYMQHSAGGKGGFSDPE
DSSEYYSETTATSGIEEDDPQLYERSTYIIPRKPSHILLEASQNPSYPKIMLVKPCKGSQ
DEPVKDGQDTGNTEAPSVPDLTRNTCQDLKDFQEPRDWRRRHQPPPTTQRHARTKQPPNS
RTPYSSRPPGHMAAPPAYCTKVTLPSGSITTVTATASVTVAVHPTLPGAVCGYSHEGYED
SETDCMEHRTEWSRSKNRPPEVYELEYLAHDRRPEGPSVTH
NT seq
4266 nt
NT seq
+upstream
nt +downstream
nt
atggcctccgacccccccagcacagatttaccccccggctacaaaacctcccacccggct
cccagctcggacctgctgcggagacccagctactgtcacgccgcctttgcactgaagcag
atcgctaagggtaaagctgtgggccagaaggcccctctctggctgcgggctcagttccag
gcacttctgttttccctgggctgctccatccagagacactgcggaaaagtcctgtttgtt
ggactcttggtgtttggagcgatggccgtgggattgcgcgtggcctccattgagacggac
attgaaaggctctgggtggaagcgggaagcagagtcagccaggagcttcgctataccaag
gacaagttgggagaggaatccatctacacgtcacaaatgctcatccaaacccctaagaaa
gagggcgagaacatactgacgcaggaggatatgctactacacctgaccgcggctttggcc
gctagcaaagtgcaggtgtcaatgtatggaaagtcgtgggatctgaacaagatttgctac
aagtccggagttccgattattgagaatgggatgattgagcggatgatcgagaagctgttc
ccgtgtgtgattatcacccccttggactgtttctgggaaggatcgcaacttcagggaggc
tccgcctatttaccggggaggagagacatccagtggacaaacttggatcccctccagtta
atggaagagctcggccagttcactagcctggatgggtttaaggagatgttggacaaggca
gaagtggggcaagcttacatggaacgaccttgtcttgaccccactgattccgagtgccca
gaaagtgccccaaacaagaaatcacagaagaccccagacattgtctccacgctccgagaa
ggctgctatgggttctctaagaagtttatgtactggcagaaggagctgattctgggaggg
atgacgaaaggtctagagggagagctgaagagcgctgaggctctgcaaaccatgtacctc
ttgatgagtcccgggcagctctatgaacatttcaaagatgattatgagattcacgacatc
aactggaatgaggagaaggctgccgccatcttggagtcatggcagagaaagtttgtggag
caagcgcagcagtcaatcttccaaaacgcatcccaggacatccacgccttctccaccacc
accctcaatgacattatgaagtcattctctgacgtcagcgccatccgggtagctggagga
tacttgctcatgttggcctacgcttgtgtcaccatgctgcgatgggactgctccaagtct
cagggggcagtgggcttggcaggtgttctgcttgtggctctctctgtggcatcaggatta
ggactctgctcccttcttggactctccttcaatgctgctacaacccaggtgctgccattc
cttgctctgggtatcggcgtggacgacatgttccttctggcacatgccttcaccgagacc
agcctgagtacccctttaaaggaaagaacaggtgaatgcctgcgacgtaccggtaccagc
gtggcactgacgtccatcaataacatgattgcctttttcatggcggccttggtgccaatc
ccagccctgcgggcgttctctctgcaggccgctgtagttgtcgtgttcaattttgcaatg
gtgctgttaatatttccagccatcttgagcctggacctccagcgtcgagaggatcagaga
ctagacatcctttgctgcttctacagcccgtgttcctccagagtgatccagattcaacca
caggaaatgcctgatgccaacgacaatcacacgtaccacccctcaccctatgggaacccc
acaattaccaccagcacccagatcaccactactgtgcaagccttcacgcagtgtgaccca
tctggacatcacattgtgactatcctgcctcccacctcccagatctccacctctccgtct
gtcattgtccccaccgtggaccccctggggtcgcaggttttcaccccctccacctccacc
cgggatttgctggctcagatggatgagagcaaagtagggagagagtgtgttccgctcccc
ttcctaaagtggagcctttctgactttgccagggagaagtacgcccccctgctgctcaag
ccagaaaccaagggaattgtggtggctcttttcatggctctcttgggccttggcctgtac
gggaccaccatggtccatgatggactttacctgaccgatattgttcctcgcgagaccaag
gaatataactttatcgccgctcagttcaagtatttctccttctacaacatgttcattgtc
accaagggtgggtttgattaccccaaatcccaggcgtccctatacgatctccatgagtct
ttcagctccgtgaagtacgttgtacgtgaagagggaagagagctaccgaagatgtggctg
cactatttccaggattggctgagaggtctccagttggcattcgatagggattgggagtct
ggcagcatcacgcaggataattaccgtaatggaactgaggatggggtgctggcgtacaag
ctcctcatccagaccggaaacaagaaggatccttttaatcttaatcatctgattagtcga
cgactggtggatgagaatggccttatccctcaagacgcgttctacatctaccttactgtc
tgggtcagcaacgatcccctgggctacgccgcctctcaagccaatttctaccctcagccg
cctgagtggatccatgaccgatatgacaccacgggggaaaacctgagaataccggccgca
gagcccattgagtttgcccagtttccattctacctgaatggcctgcgtcagacgtctgat
ttcatagaagccatagagagcgttcgctcggtgtgcgaagagttcatcaagcaaggagtg
tacagctaccccagcggttaccccttcctcttctgggagcagtacatcggcctgcgacac
tggttcctcctggcgattagcatagtgctggcatgtacattcttggtgtgcgccattctc
ctgcttaatccatggacagccggcatcattgttttcatcttggccatgatgactgtggag
ctgtttggcattatgggtttgatcggcattaagctcagcgccatccctgtggttatactc
atcgcatctgttggcattggcgtggagtttacggtccatgtggctttgggatttctcacc
gccatcggcgaccggaaccaacgctccgtactcgctctggaacatatgtttgcgccagtt
ttagacggcgccatttccacgcttcttggggtacttatgctggcgggatccgaatttgac
tttattttaaggtatttcttcgctgtgctcaccattctcaccatcctggggctgctcaat
ggcctggtcttgcttcccgtattgctctccttgattggacccccagccgaggtcactccc
gcagacaatggtaactgcctccctgcctccaccctggagtctctgcccccacatcttagc
catcacaccttctacatgcagcacagtgctgggggaaaagggggcttcagcgacccagag
gactcttcggagtattactctgagaccaccgctacgtcgggaatagaggaagatgacccc
cagctctatgagcgcagcacctacatcattccccgaaagccatcacacattctgctggag
gccagccagaacccttcataccccaaaatcatgctggtgaagccttgtaaagggagccag
gatgaacctgttaaagacggtcaggacaccggtaacactgaagcaccatctgtgccggat
ttaaccaggaacacctgccaagatctgaaagactttcaggagcctagagactggagaagg
aggcaccagccccctcctaccacacagaggcatgcacggactaagcagccccccaattct
aggactccgtacagcagcaggcctccaggccatatggctgcacctccggcctactgcact
aaggtgacattgccaagtggctccatcaccacagtgactgctacagcctcggtgactgtt
gccgtacatcccaccttgccgggagcagtgtgcggctacagccacgaaggttatgaggac
agtgagacagactgtatggaacacaggactgaatggtcccgaagtaaaaacaggccccct
gaggtgtatgagctggaatatcttgcgcatgacagaagaccagagggaccctcggtaacg
cactag
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