Pseudophryne corroboree (corroboree frog): 134958429
Help
Entry
134958429 CDS
T11513
Symbol
PDZRN3
Name
(RefSeq) E3 ubiquitin-protein ligase PDZRN3 isoform X1
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
pcob Pseudophryne corroboree (corroboree frog)
Brite
KEGG Orthology (KO) [BR:
pcob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pcob04121
]
134958429 (PDZRN3)
Enzymes [BR:
pcob01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
134958429 (PDZRN3)
Ubiquitin system [BR:
pcob04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
134958429 (PDZRN3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-RING_UBOX
Sina_ZnF
zf-C3HC4_4
zf-C3HC4_3
zf-RING_5
Prok-RING_4
zf-TRAF
zf-rbx1
PDZ_Tricorn
TRAF3_RING
Motif
Other DBs
NCBI-GeneID:
134958429
NCBI-ProteinID:
XP_063797097
LinkDB
All DBs
Position
9:430611766..430981760
Genome browser
AA seq
1055 aa
AA seq
DB search
MGYELERFCGEVDPDFQCSLCHRVLEDPLSTPCGHVFCAGCVLPWVVQQGSCPVRCRRLS
AKELHHVLPLRSLILKLEIRCEHRARGCDKVLSLQSLAEHVDMCDYSPARCRHRGCSEVL
NLRDMDAHMREQCEHRPAGICQGGCGLTLTCREQSLGEHCCLRALQGHNGLLQAKVSGLE
TELKKRALRAGRREKSLVSRLSAVQNELQMTALRYQKKFTEYSARLESLTRAVAAAPGKG
EETTALTLVLHRESGSLGFNIIGGRSCVENQDGTSSEGIFVSKICDSGPAGKEGGLQIHD
RIIEVNGKDLSRATHDMAVEAFKTAKEPIVVQVLRRTPRTKMFSPSADTQMTTDTGTQTE
ITFEHIMALSKISSPSPTVSALDPYLLNEEHSSPHEYFDPNDFIGGLHQEIDRDELELEE
IDLYRLNSQDKLGLTVCYRTDDEEDTGIYVSEIDPNSIAAKDGRIREGDRIIQINGIDVH
NHEEAVALLTSEDTKNVFLLVARPELQLDEGWMDDDRNDFLDDLHMDMLEEQHHQAMQFT
ASMLQQKKLEEDGGTTDTATILSNQLEKDSGVGRTDESTRNDESSEQENIADDHTTSSNT
LGSQKKLMYSQDTLGSGDLQFSNESFISADCTDADFLGIPMDECERFRELLELKCQVQSS
SQHGKYYQTSTMETSRSDQESVDHELEMLNEELHSIELECLNIVRAHKMQQLKEQYRESW
MLHNSGFHNYNTSIDVRQHELSDITELPEKSDKDSSSAYNTGESCRSTPLTLEISPDNSL
RRAADVLNCPNVEGAAISASSDASQKSLRQSGGSRESSPARYLQPAPDSDPSKPAEVKDK
RASDLGKNQSAPPYRHSPYKHAHIPAHAQHYQSYMQLIQQKSAVEYAQSQMSLVSMCKDL
QNSSEPRMEWKVKVRSDGTRYITKRPVRDKLLRERAIKIKEERSGMTTDDDAISEMKMGR
YWSKEERKQHLRKASEQRKRKEFMIQSRLDCLKEKQTAEDTKEVSIIDLSHKKMMKKRNK
KIFDNWMTIQELLTHGTKSPDGTRVYNSLLSVTTV
NT seq
3168 nt
NT seq
+upstream
nt +downstream
nt
atgggctacgagctagagcgcttctgcggggaggtggacccggacttccagtgcagcctg
tgccaccgagtgctggaggacccgctgagcaccccctgcggccacgtcttctgcgccggc
tgcgtcctgccctgggtggtgcagcaggggagctgcccggtacgctgccgcaggctctcc
gccaaggagctccaccacgtgctgcccctgaggagcctgatcctgaagctggagatccgc
tgcgagcaccgcgcccggggctgcgacaaggtgctgagcctgcagagcctggcggagcac
gtcgacatgtgcgactactcgccggcccggtgccgacaccgcggctgcagcgaagtgctc
aacctgcgggacatggacgcccacatgcgggaacagtgcgagcaccggccggcgggcatc
tgccaggggggctgcgggctgacgctgacctgccgggagcagagcctgggcgagcactgc
tgcctgcgggcgctgcaggggcacaacgggctgctgcaggcgaaggtctccgggctggag
acggagctgaagaagagggcgctgcgggccggccgccgggagaagtcgctggtgtcccgg
ctctccgccgtgcagaacgagctgcagatgacggcgctgcgctaccagaagaagttcacg
gagtacagcgccaggctggagtccctcacccgggctgtggccgctgcccccggcaaggga
gaagagacgaccgcactgactctcgttctccaccgagaatctggatccctgggatttaat
attattggtggccggtcgtgtgtggagaatcaggacggaacatccagtgaaggaattttt
gtgtcaaagatatgtgacagtggcccagctggcaaagagggcggactgcagatccatgac
aggattatcgaggtaaatggcaaggacttatccagggccacgcatgacatggcggtggaa
gccttcaaaacggccaaagaacccattgtggtgcaagtcttacggagaaccccgcgcact
aagatgttcagcccctcggcagacacgcagatgaccaccgacacagggacacagactgag
atcacatttgaacacatcatggccttgtccaaaataagctccccgtccccaaccgtgtct
gctctggatccatatctcttaaatgaagaacactcgtcacctcacgaatattttgacccc
aatgacttcatcggaggattgcatcaagaaattgatagagatgaattagaactcgaggaa
atagatctgtacagactgaacagccaggataagctggggctgacagtatgctacaggaca
gatgatgaggaggacacaggaatatatgtcagtgagattgacccgaatagcattgctgct
aaagatgggcggatcagagagggcgaccggataatacaaattaacggcatcgatgtgcac
aaccatgaagaagcagtggccctccttacaagcgaagacacgaaaaatgttttcttgcta
gtggccaggccagaattacagctggatgaaggatggatggacgatgacagaaatgatttc
ctcgatgatctacacatggacatgttagaggaacagcaccaccaagcaatgcaatttaca
gccagcatgctccagcagaaaaaacttgaagaagacggtggaaccacggacactgcgacc
attctgtccaaccagctggagaaggacagcggggttgggcgcacagatgaaagcacccgt
aacgacgagagctcggagcaggagaatattgccgatgatcacacgacatcctccaacacg
cttggaagtcagaagaagctcatgtacagccaggatactctgggcagcggagacctgcag
ttcagcaacgagtctttcatatctgcagattgtaccgatgccgacttcttgggcatcccc
atggacgagtgtgagaggttccgagaacttctcgaactgaaatgccaggtgcagagctcc
agccagcatggtaaatattaccaaaccagcaccatggagaccagtcggagcgaccaggaa
agtgtagaccatgaactagagatgttgaatgaggagttacatagcatcgagctcgagtgt
ttgaacattgtccgtgcacacaaaatgcaacagctgaaagagcaatacagagagtcctgg
atgcttcacaatagcggttttcacaattacaacacgagtatcgatgtgcgacaacacgag
ctctccgacatcacagaactgccagagaagtcagacaaggacagctcaagtgcctacaac
accggggaaagctgtcgtagcacccctctgactttagagatctctcctgacaactcattg
cgtagggcggcagatgtcctcaactgcccaaatgttgaaggggcagcaattagcgcctcc
tccgacgcatctcagaagagcttgcgacaaagcggtggcagtcgagagtccagtcccgcc
aggtacctccaacctgccccggactctgaccccagcaaaccagcggaagtcaaagacaaa
agagccagcgacttgggtaaaaatcagagcgcgccaccatatcgccactcgccttataaa
cacgcccacatccctgcacacgcacagcactatcaaagctacatgcagctcatccagcag
aaatctgcggtggagtacgcacagagccagatgagcttagtgagtatgtgtaaagatcta
caaaactcgtcggagcccaggatggaatggaaagtgaaagtacggagtgacggaacgcgt
tacatcaccaagcggccagttagagacaaactgctacgagaaagggccattaagatcaag
gaagagaggagtgggatgacgaccgatgatgacgctataagcgagatgaaaatgggacgt
tactggagcaaagaagagcggaaacagcacctccgcaaggcctccgagcagaggaagaga
aaagagttcatgatacagagcaggctggattgtttgaaggagaaacagactgcagaggac
acaaaggaggtcagcatcatcgaccttagccacaaaaaaatgatgaagaagcgcaataaa
aagattttcgacaattggatgacaatacaagaactgctaacacacggaacaaaatctcct
gacggaacccgagtgtacaactcgcttctctccgtcacaactgtataa
DBGET
integrated database retrieval system
