Pseudophryne corroboree (corroboree frog): 134965789
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Entry
134965789 CDS
T11513
Name
(RefSeq) ATP-dependent RNA helicase DDX19B
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
pcob Pseudophryne corroboree (corroboree frog)
Pathway
pcob03013
Nucleocytoplasmic transport
pcob03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pcob00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
134965789
03015 mRNA surveillance pathway
134965789
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcob03019
]
134965789
Enzymes [BR:
pcob01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
134965789
Messenger RNA biogenesis [BR:
pcob03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
134965789
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Motif
Other DBs
NCBI-GeneID:
134965789
NCBI-ProteinID:
XP_063798224
LinkDB
All DBs
Position
10:complement(15786887..15837017)
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AA seq
492 aa
AA seq
DB search
MATDSWAEAVDEQEAAAETFNKLQLKDDKEPTLKPESNGTDLAAAGDRAEKASNGDGEEK
SEEDDKEDKAAQSLLNKLIRNNLVNTTNQVEVLQRDPNSPLYSVKSFEELRLKPQLLEGV
YAMGFNRPSKIQENALPMMLAEPPQNLIAQSQSGTGKTAAFVLAMLSRVNPANRYPQCLC
LSPTYELALQTGKVIEQMGKFYPEMKLAYAVRGNKLERGYKIPEQIVIGTPGTVLDWCSK
LKFIDPKKMKVFVLDEADVMIATQGHQDQSIRIQRMLPSDCQMLLFSATFEDSVWKFAQK
VVPEPNIIKLKREEETLDTIKQYYVLCNSREEKFHALCNIYGVITIAQAMIFCHTRKTAS
WLAGELSKEGHQVALLSGEMMVEQRAAVIDRFREGKEKVLVTTNVCARGIDVEQVSVVIN
FDLPVDKDGNPDNETYLHRIGRTGRFGKRGLAINMVDSKHSMNILMQIQQHFNKKIEELD
SNDIDEIEKINN
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atggcgactgattcctgggcagaggctgtggatgagcaggaggcggcggccgagacgttc
aacaagctgcaactgaaagacgataaggagccgaccctcaagcctgagagtaacggcacg
gacttggcagctgctggtgatcgcgcagagaaggcgagcaatggagacggtgaggagaaa
tcggaggaggacgacaaagaggacaaagctgcacagtcgctgctcaacaaacttatacga
aataacctggttaacaccacaaaccaagtggaagttctgcagcgagatccgaactctcct
ttgtattctgtcaaatcctttgaggagctgaggctaaagccgcagctcctagaaggggtc
tacgccatggggttcaaccgaccgtctaaaatccaagagaatgcgttgccgatgatgctg
gcagagccaccccagaacctaattgctcagtcgcagtccggcacaggaaaaacagctgcc
ttcgttctagctatgctctctcgggtcaatcctgcaaatagatatccacagtgcctgtgt
ctctcacccacctatgagttggcattgcagacaggaaaagtcattgagcagatggggaag
ttctatccagagatgaaactggcctatgctgtcagaggaaacaagttggagcgcggttat
aaaatcccggaacagatcgttatcggaacacctgggacggtgctggactggtgctccaag
ctgaagttcatcgatcccaagaagatgaaggtgtttgtgttggatgaagccgatgtcatg
atagcaacgcaggggcaccaggaccagagcatccgtatccagaggatgttgccgagcgac
tgccagatgctcctgttctcggctacctttgaggattcggtgtggaaatttgctcagaaa
gtggtccccgagcccaacatcatcaagctgaagcgagaagaggagacgctggacaccatt
aagcagtactatgtgctctgcaacagccgggaagagaagttccatgcactgtgcaacatc
tatggcgtcataaccatcgcgcaagcaatgatcttctgccacactcgtaagactgcatct
tggttggcaggtgagctgtccaaagagggccaccaggtggcgctgcttagcggagagatg
atggtggagcagagggcagcggtcattgaccgatttagagaaggaaaagagaaggtgctg
gttaccaccaatgtgtgcgccagaggcattgatgtcgagcaagtctccgtggtgataaac
tttgacctccccgtggacaaagatggcaatccagacaacgagacttatctccacagaata
ggccgtactggccgtttcggcaagaggggtctggctatcaatatggtggacagcaaacac
agcatgaacatcctgatgcaaatccagcagcacttcaataagaagattgaggagctcgat
tccaatgacattgacgagattgagaaaataaacaactga
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