Pseudophryne corroboree (corroboree frog): 134966604
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Entry
134966604 CDS
T11513
Symbol
DDX6
Name
(RefSeq) probable ATP-dependent RNA helicase DDX6
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
pcob Pseudophryne corroboree (corroboree frog)
Pathway
pcob03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pcob00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
134966604 (DDX6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcob03019
]
134966604 (DDX6)
03036 Chromosome and associated proteins [BR:
pcob03036
]
134966604 (DDX6)
Enzymes [BR:
pcob01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
134966604 (DDX6)
Messenger RNA biogenesis [BR:
pcob03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
134966604 (DDX6)
mRNA degradation factors
5'-3' decay
Decapping complex
134966604 (DDX6)
Chromosome and associated proteins [BR:
pcob03036
]
Eukaryotic type
Gene silencing
piRNA pathway
134966604 (DDX6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
134966604
NCBI-ProteinID:
XP_063799555
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All DBs
Position
10:complement(313112589..313209918)
Genome browser
AA seq
480 aa
AA seq
DB search
MSTTRTENPVLMGLSSQNGQLRGPVKPNAGPGSGGTQTQQINQLKNASTINNGSQQQAQS
MGSGIKPGDDWKKTLKLPPKDLRIKTSDVTSTKGNEFEDYCLKRELLMGIFEMGWEKPSP
IQEESIPIALSGRDILARAKNGTGKSGAYLIPLLERLDLKKDCIQAMVIVPTRELALQVS
QICIQVSKHMGGVKVMATTGGTNLRDDIMRLDDTVHVVIATPGRILDLIKKGVAKVDHIQ
MMVLDEADKLLSQDFVQIMEDIIITLPKNRQILLYSATFPLSVQKFMSSHLQKPYEINLM
EELTLKGVTQYYAYVTERQKVHCLNTLFSRLQINQSIIFCNSSQRVELLAKKISQLGYSC
FYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVNVVINFDFPKLAETYLHR
IGRSGRFGHLGLAINLITYDDRFNLKSIEEQLGTEIKPIPSSIDKSLYVAEYHSESGEKH
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccacaagaacagagaaccctgttttaatgggtctgtccagtcaaaatgggcaa
ttgaggggcccggtgaaacccaatgcggggcctggaagtgggggaacacagacacagcag
ataaaccagctgaaaaatgccagcacaatcaataatggaagtcagcagcaagcacagagt
atgggcagcggtattaaacctggtgatgactggaagaagaccttaaagctccctccaaaa
gatcttcgaatcaagacttcggatgtcacctcaacaaaaggcaatgagtttgaagattac
tgtctaaaaagagagctgctcatgggaatttttgaaatgggatgggaaaaaccatctcca
attcaggaggaaagcattcccattgcattgtctggtagggatatcttggctagagcaaag
aatggaactggcaagagtggagcctacctcattcccttacttgaacggcttgacctaaag
aaggactgcatacaagcaatggtgattgtacccactcgagagcttgcacttcaggtcagt
cagatctgcatccaagtcagcaagcacatgggtggggttaaagtcatggcaacaacggga
ggcaccaacctgagagatgatataatgaggctggatgatacagttcatgtggtgattgca
acccccgggagaattctggatcttataaaaaaaggcgtagctaaagtagaccacattcag
atgatggttttggatgaggcggataaactgctgtctcaagattttgtgcagataatggag
gacataattattacgctacctaaaaaccgacagattctcctttattcagccacgtttcca
cttagtgtacagaagtttatgtcctctcacttgcaaaaaccatatgaaattaacctgatg
gaggagctcacactgaagggagtaacgcaatactatgcctatgtaacagagaggcaaaaa
gttcactgcctaaacacactcttctcaaggctccagataaatcaatcaataatattctgc
aactcctctcagcgggtggagcttttggccaagaaaatctctcaattgggttattcctgc
ttctatatacatgcaaagatgagacaggagcacaggaacagagtgttccacgatttcaga
aatggcttgtgccgtaaccttgtttgcactgatttgtttacccgtggtattgatatccaa
gctgtgaatgtggtgataaactttgactttccaaagctggcagagacctatctacatcgt
ataggcagatcaggtcgctttggccaccttggccttgccataaacctgatcacttacgac
gacagatttaaccttaaaagtattgaagaacagctgggaacagagatcaagcccatcccc
agcagcatcgataaaagcttatacgtggcagaatatcacagcgaatccggagagaagcat
taa
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