Pseudophryne corroboree (corroboree frog): 134969286
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Entry
134969286 CDS
T11513
Symbol
SART1
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 1
KO
K11984
U4/U6.U5 tri-snRNP-associated protein 1
Organism
pcob Pseudophryne corroboree (corroboree frog)
Pathway
pcob03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pcob00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
134969286 (SART1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pcob03041
]
134969286 (SART1)
04121 Ubiquitin system [BR:
pcob04121
]
134969286 (SART1)
Spliceosome [BR:
pcob03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
134969286 (SART1)
Ubiquitin system [BR:
pcob04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
134969286 (SART1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SART-1
HIND
DUF2167
Motif
Other DBs
NCBI-GeneID:
134969286
NCBI-ProteinID:
XP_063801205
LinkDB
All DBs
Position
11:182443611..182647852
Genome browser
AA seq
765 aa
AA seq
DB search
MGSSKKHKEKERDRDASLAGGGGEDRHREHKKHKHKERERERRKRSRERERPRDREGRSR
ATKEADSRRIKREKLDSSYEHGIAPKSAGGDSSLSIEETNKLRAKLGLKPLEVNTVKTEC
GTKEDPVAAAIINPMVLRHQQEIREKLAAAKEKRMLNQKLGKIKSLGEDELWLDDTAAWI
ERSRKLQAEKDKAEKRAKLLAEMDEEFGVSNLVEEEFGQKKHYTSEDLQGLTVEHNTESF
GEGKTVILTLKDKGVLDEDDADVLVNVNMLDKERADKNVELKKKRPDYKPYEEVENVDDM
VMFRHKSVLSKYDEEIDGEKKKSFRLESGGTADGSWEKELRSIRQTLHNQAQTLELPGLK
IASEYYTPDEMVSFKKTKRRVKKIRKKQTNDDLILVKPDTRENDFGSRSRGRGRRYIVDS
EDEEQSVALNNVMPQSDDLRWENMEISDQEDMPDSSVVVDEDELEIELQKQLEKSRRLKQ
IQQQKDSSEKIVTMVKKLNTQKSQDEDEDDDKKGSIVFNATSEFCRTLGEIPTYGLAGNR
EDQEDLMDFEKEEEESENEDRDSDGDENLGWSMVNLDEEKTHQDYSASSTTILDEEPIVN
RGLAAALQLCQNKGLLETTLQKIARVKATNRSLPSAVYCIEDKMAIDDKYSRREEYRGFT
QDFKEKEGYRPDVKIEYVDETGRKLCPKEAFRQLSHRFHGKGSGKMKTEKRMKKLDEEAL
LKKMSSSDTPLGTVALLQEKQKAQKTPYIVLSGSGKSMTANTLIK
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atggggtcgtctaagaaacacaaggagaaggagcgagatcgcgatgcttcactcgcaggg
ggtggaggggaagatcgtcacagagagcacaagaagcacaagcacaaagaacgagagcga
gaaaggcgcaagagatcccgggaaagagagaggcctcgggacagagagggaaggtcaagg
gctaccaaggaagcagactctcgcaggattaaaagggagaagctggactcttcttatgag
cacggtattgctcccaaatctgcaggtggggattcatcattaagcattgaggagacaaac
aaactgcgtgctaaacttggcttgaaacccttggaagtgaatacagttaaaacagagtgt
ggcactaaagaagaccccgttgcagccgctattattaacccaatggtcctgaggcatcaa
caagagataagagagaaattagcagctgcaaaagagaaaaggatgctgaaccagaaatta
ggaaaaataaaatccctgggggaagatgaactgtggttagatgatacagccgcttggatt
gagcgaagtcggaagcttcaagcagaaaaagataaagctgagaagagggcaaaactgcta
gcagaaatggatgaagaatttggtgtgtctaatcttgtggaagaggaatttggacaaaag
aagcattacacctcggaagatttgcagggactgaccgtagagcacaatacagagtctttt
ggtgaagggaagactgtaattctaaccctcaaggacaaaggtgtccttgatgaagatgat
gctgatgtcttagttaatgtaaatatgctagacaaagaaagagcagataaaaatgtagag
cttaagaagaaacgacctgattacaaaccatatgaggaagtggagaatgtagatgacatg
gtaatgttccggcacaaatctgtactttccaaatatgatgaggagatcgacggggagaag
aagaaatcattccgcttggagagtggtggaactgcagatgggtcttgggaaaaggagctg
cggagtatacggcaaaccttacacaaccaggcacaaaccctagaacttccaggattgaaa
attgcatctgagtactatacacctgatgagatggtgtccttcaagaagacaaagcggcga
gtgaaaaagattcgcaagaagcagacaaatgatgacctcatactcgtaaaaccagatacc
cgagagaatgactttggttccagatctcgggggcgtggacgtagatatattgttgattct
gaagacgaggagcaaagtgtggcgctcaataatgtcatgccgcaatctgatgaccttcgt
tgggagaacatggagattagtgaccaagaggatatgccagactcttcagttgttgtggac
gaagatgaattggaaattgagttacaaaaacagcttgaaaaaagtagacgtctcaagcag
atccagcaacagaaagacagcagtgagaagattgttacaatggtaaaaaagctaaacact
cagaagagtcaagatgaagatgaagatgacgataagaaagggtccattgtgttcaatgca
acttctgaattctgcaggacacttggggagataccaacatatgggctagcagggaacagg
gaagatcaagaggatttaatggactttgaaaaagaggaggaggagtctgagaatgaagat
agagactctgacggagatgaaaaccttggctggagtatggtgaacctggatgaagagaag
acacatcaggattattctgcctcttcaacaaccattttggatgaagagccaattgtgaac
agaggcctggctgctgcattacagctgtgccagaacaaaggcttattagagacaacttta
caaaagatagcacgtgttaaagctaccaataggtcccttccttcagctgtatactgcata
gaagacaaaatggcaatagatgacaagtatagcagaagagaagagtacagaggatttaca
caggacttcaaggaaaaagaaggctacagaccagatgtcaagattgagtacgtcgatgaa
actggacggaagctttgtccaaaggaggcttttagacaactgtctcaccggttccatggc
aagggctctggtaaaatgaaaacagaaaagcgtatgaagaaactggacgaggaagctctg
ctgaaaaagatgagttctagtgacacccctcttggtaccgttgcactgcttcaggagaag
cagaaggcccagaagacaccttacattgttctcagtgggagtgggaagagcatgacagcg
aacacacttatcaaataa
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