Pseudophryne corroboree (corroboree frog): 134969382
Help
Entry
134969382 CDS
T11513
Symbol
CHD9
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 9 isoform X1
KO
K14438
chromodomain-helicase-DNA-binding protein 9 [EC:5.6.2.-]
Organism
pcob Pseudophryne corroboree (corroboree frog)
Brite
KEGG Orthology (KO) [BR:
pcob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pcob03036
]
134969382 (CHD9)
Chromosome and associated proteins [BR:
pcob03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
134969382 (CHD9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
BRK
Helicase_C
Chromo
ResIII
HDA2-3
DEAD
HTH_CHD1_Hrp3
Motif
Other DBs
NCBI-GeneID:
134969382
NCBI-ProteinID:
XP_063801378
LinkDB
All DBs
Position
11:complement(235428321..236003903)
Genome browser
AA seq
2867 aa
AA seq
DB search
MTDPMMDFFDDTHLFDETLGLSDDAFVQHDSVSLVDELNLGAEFEPLHVDSLNHVQDSQT
HQKISEFDTLNQFDSVKLHQVSQSYNSPVESVLSPRSPFSCSPIHTQSQGNGMFPDDGSP
MWGHQTATSIQSQNGSPFHQHGHSQPMPQSKGFVTHHDFALFQSSEQQRVSIQPQHNRNS
INTGQEPLNLPKNFMDVNVSLPHRTSNAQQTSMINNTTPQDPLPLEQFSQVAPTSLHFCG
NSVGTPHENTFDSHSPAPCPVNATPTFSTHYPFSNNHLNHATHSLSDFTESPGFSDLEVK
QEPSPHVLNPSEQLHPNDFQMVHASHPQGNYNRTKMSPMTINFQAQDGSSVRLSHFNDHM
ESNGFSPLEDNLLQQVDSQSEPFTGLDPEDLLQEDLLPHFDATYAQDSSNSTHAVLEHHD
AETCVEEQINIPNDLLNIQQQDLHPNPWNTMSSNHLHLHERRRVTSQGKPPCSKKLDGSR
AYHKLPNSKVKSASERRPKKKTDSESKQEKANRIISEAIAKAKERGERNIPRVMSPENFP
SVSSSEGKEEKRGRKAKSKPKDKESKKTKTGLTSKLKDEKKIGKLIITLGRKQKRKIESS
DDISDSETASRTLKEDDPQKRRSNRQVKRKKYAEEGEGKHSEEEPKANVKNKKSGTPLPA
EQPLQLFVENPSEEDAAIVDKILSSRTVKKETQSGMLVDVEEFYVKYKNYSYLHCEWATE
QQLLKDKRIQQKIKRFKVRQAQRAHFFADMEEEMFNPDYVEVDRVLEVSFCEDNDTGEPV
IYYLVKWCSLPYEDSTWELKEDVDQGKIEEFEQLQAIRPDTRKMDRPPSNSWKKIHLSRE
YKTGNQLREYQLEGLNWLLFNWYNRRNCILADEMGLGKTIQSITFLHEIFLAGIHGPFLI
IAPLSTITNWEREFRTWTDLNVVVYHGSMISRQMIQQYEMYFRDSQGRIVRGTYKFQAII
TTFEMILGGCPELNAIEWRCVIIDEAHRLKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTV
EELFSLLHFLEPLRFPSESTFMQEFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKKLAPK
EETIIEVELTNIQKKYYRAILEKNFAFLSKGAGQANVPNLVNTMMELRKCCNHPYLIKGA
EEKILGEFRETHNPMAADFYLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDI
LEDYLMHKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTC
IIFDSDWNPQNDLQAQARCHRIGQNKAVKVYRLITRNSYEREMFDRASLKLGLDKAVLQS
MSGRENSVGGIQQLSKKEIEDLLRRGAYGAIMDEEDEGSKFCEEDIDQILQRRTKTITIE
SEGRGSTFAKASFVASGNRTDISLDDPNFWQKWAKKAEIDLDSASGRNSLVIDTPRIRKQ
TRPFSATKDELAELSEAESEGDDKPKLRRPYDRSSGYGRTECFRVEKNLLVYGWGRWRDI
LSHGRFKRQLNEQDVEIICRALLAYCLVHYRGDEKIKSFIWDLITPTEDGRTRELQNHLG
LSAPVPRGRKGKKVKTQTSTFDIHKAEWLRKYNPEHLLQDDGYKKHLKHHCNKVLLRVRM
LYYLKQEVIGPHSKNVLDGVDVREIDLRVPEPDHSELPVNWWDADADKSLLIGVFKHGYE
KYNTIRADPALCFLERAGKPDEKAVAAEQRANDYIDGDVEDPEYKPAPALFKDDMEDDAS
SPGDLVIADGDGQGQEGDKGYWPTQSTLTTRLRRLITAFQRTSKFRQIQQIPPMFPIHTT
VTQQAPYEEVSLNPKVAAKIERQQRWTRREEADFYRVVSTFGVVFDPGRGQFDWTKFRAM
ARLHKKTDESLEKYLYAFIAMCRRVCRLPSKEDLAESPISIQPITEERASRTLYRIELLR
KVREQAIRHPQLFERLKLCQPSPDLPVWWECGSHDKDLVIGAAKHGVSRTDYNILRDPEL
SFMVSQRNYNQNKGTSSTPLIAQSNQLLLSTSPLTPQSRTQDIKGSPNDEVRVRDDTVKD
ETSSFKEESAKMKVEEVSLINGPLLHTGEHKSTIKSEASRRMVAARTEPLTPNLTSKKQR
ISKRGSASSSGSDSDSNRSSCSSRSSSSSSSSSSSCSRSGSSSSSSSSSCSSSSSSSSSS
SSSSSSSEDSDSDGDVQKSERVPHVKAYDEESVASMSTIQDETQDSFQLDNGTPNSNYLV
QGGYLFAAAHWPKDRVVINRLDSICQAVLKGKWPTTRRNYDGTSVASFYTTKLLDSSGAA
MEYSEPSPQVATCVAIKEEPNQLPQMSKVKKHVQEKEFTVKINDESGLKLTFQKQGIPQK
RPLDSEEGMGQQQYLARLQDLQNASETSLVNFPKSTAALGTSSMVPPSDNMNGILTETQP
VVKKRRGRRKNVEGVDILYMNRNKTLNHVNPIASPSLPQPATCPQVHLGPQRALDADSPV
SVINLKDGTRLAGDDAPKRKDLESWLKAHPNYVEDLGAFIPRMQLHEGRPKQKRHRCRNP
NKLDVNSLTGEERVQLINKRNARKVGGAFAPPLKDLCRFLKENPEYGVAPEWGDVVKQSG
FLPDSMFDRILTGPVVREEVSRRGRRPKSEIAKAAAATSAGSSGNVTSLIANGLIPGMDL
ASYQALQQNFQSLQSLQLTAGLIGLPAGLSASGGDAKNMAAMFPMLLSGMAGLPNLLGMG
NLLNKSSDPCPEGKEKNCTNDCKETENNSERTISPASDKPKQNSSPPSTSMGTALRAGSL
SLNPLLLPNIIYPGMLLTPGLNLHIPAVSQPNVFDVQNTKKGNGPVQAPDSTAEPTPAPS
LEGKAGNEVASQNENSTDEGSEKADPSSGSNSPSSSSSEDSDSSEED
NT seq
8604 nt
NT seq
+upstream
nt +downstream
nt
atgactgatcccatgatggatttttttgatgatacacacctttttgatgagactttaggt
ctgtcagatgatgcatttgttcaacacgactcagtatctctggttgatgaattgaacctt
ggagcagagtttgaacctctccatgttgactctttgaatcacgtgcaagattctcaaacc
caccaaaagatcagtgagtttgatacactcaatcagtttgattctgtaaaattacatcaa
gtaagccaatcctataacagtccggttgagagtgttttgtctccgcgatctccgtttagc
tgctctccaatacacacacaaagtcaaggcaatggtatgtttcctgatgatggaagtccc
atgtggggacaccaaactgccacaagtattcaaagtcagaatggctccccattccaccaa
catggacactctcagcctatgccgcaaagtaaaggatttgtaacacaccatgattttgcc
ttgtttcagtccagcgagcaacagcgggtctcaatacagccgcagcacaataggaacagt
atcaacactggtcaggaacccttgaacctaccaaaaaacttcatggatgttaatgtttct
ttaccacatagaacttctaatgcccaacaaacttccatgattaacaacacaactccacaa
gatcctttgcctttagaacagttttctcaagtagccccaacatccttgcacttttgtggc
aattcagttggaacgccgcacgagaacacatttgatagccactctccagcgccttgccct
gtgaatgctacaccaacgttttctactcattatcctttctcgaacaatcacctaaaccat
gccacacattctttgtcagactttactgaaagcccaggattttcagatttggaagtcaag
caggagcctagtccacatgttctgaaccctagcgaacaattacaccctaacgatttccag
atggtacatgcttcacatcctcagggtaactacaatagaacaaaaatgtctcctatgacc
attaatttccaagcccaagatggttcctctgttcggttgagccacttcaatgaccatatg
gagagcaatgggttttcacctttggaagacaaccttttgcaacaagtcgattctcaatct
gagccatttacagggcttgatccagaggatttgctacaggaagacctactgccacatttt
gacgcaacatatgcccaagacagctccaattcaacacatgctgtgctagagcatcatgat
gcagagacttgtgttgaagaacagataaatattccaaatgatcttcttaacatccagcaa
caagatctgcatcctaatccttggaataccatgtcatccaatcatcttcatctccatgag
aggagacgtgtgacttcacagggaaagcctccctgctccaaaaagcttgatggctctagg
gcctaccacaagctcccgaattccaaggtgaagtcagcatctgagaggcgccccaaaaaa
aaaactgactctgagagcaaacaggagaaggctaatcggatcatctccgaagctattgcc
aaagccaaggaaaggggcgagaggaacattccccgggtcatgagccctgagaacttccct
agcgtctcctcttcagagggcaaggaggaaaaacggggacggaaagcaaaatccaaaccc
aaggacaaggaaagcaagaaaaccaaaactggtctgacctccaaactaaaagacgagaag
aaaattggcaaattaataattactctgggccgcaagcaaaaaagaaagattgaatcatca
gatgatatttctgactctgaaacagcttcacggactctaaaagaagatgatcctcagaag
cggagatcaaaccggcaggtaaagaggaagaaatacgcagaggagggggaggggaagcat
tcagaggaggaaccaaaggccaatgttaaaaacaagaagagtggcaccccactgccagca
gaacagcctctgcaattgtttgtggagaaccccagtgaagaagatgctgccattgtggat
aaaatattatcttcaaggactgtaaaaaaagagactcagtccgggatgttggttgacgtg
gaagaattttatgttaagtacaagaactactcttacctccactgtgaatgggccacagag
cagcaactgctgaaggataaaaggattcagcagaagataaaacgtttcaaggtcagacag
gcacaaagggcgcacttctttgctgatatggaagaagaaatgtttaatccagattatgta
gaagtagatcgtgtgttagaagtttccttctgtgaagataacgatactggagagcctgtt
atttattatttagtaaagtggtgttcactgccatatgaagacagcacgtgggaattgaag
gaagatgttgaccagggaaaaatagaggagtttgagcaactgcaagccatccgacctgat
actaggaaaatggatcgaccaccttctaactcttggaagaaaatccacctgtcgcgggaa
tataaaactggtaatcagctcagagaataccaactggaagggcttaactggctgcttttc
aactggtataacagacggaactgtattttggcagatgagatgggcctgggtaaaactatt
cagagtatcacattccttcatgagatattcctggccgggatccatggcccgttcctcatc
atcgctccactttccaccatcactaactgggaacgagagtttcgcacttggacagatctc
aatgtggttgtgtaccatggcagcatgatcagccgacaaatgatccagcaatatgagatg
tattttcgggactcccagggtcgtattgtccgtgggacgtacaagttccaagccatcatc
accacgtttgagatgattttggggggctgcccagagctgaatgctattgagtggaggtgt
gtgatcattgacgaggcgcacaggctgaagaataagaactgcaaactgctggagggtctg
aaactcatgaatctggaacataaagtgcttttaacaggaactcctctgcaaaacacagtg
gaggaacttttcagcctactgcatttcctggagcccctgcgctttccctctgagtctacg
ttcatgcaagagtttggagacctgaagactgaggagcaggttcaaaaactacaggccatt
ttaaaaccaatgatgcttcgacgtcttaaggaagatgtggagaagaaactggcccctaag
gaagagacaatcatagaggtagagctaactaacatccagaagaagtattacagagccatc
ctggagaagaactttgccttcctgtctaaaggggctgggcaagcaaacgtccccaacctg
gtcaacaccatgatggaactgcgcaagtgctgtaaccacccttatctcattaaaggtgct
gaagagaagattctaggcgagttcagagaaacgcacaatccaatggctgcagatttctac
ctccaggccatgatccaatctgctggaaagttagtcctcatagataaattactgcccaaa
atgaaggcaggaggccacaaggtgctcatcttctcccagatggtgcgttgtctggacata
ttggaggactatctcatgcacaagagatacctctatgagcgcattgatgggcgagtccga
ggaaacctacggcaggctgcaatcgatcgcttcagtaagccagattctgatcggtttgtg
ttcctgctttgcaccagggcgggcggcctggggattaacctgactgctgctgacacctgc
atcatatttgactctgactggaacccacagaatgacctccaggcccaagctcggtgtcat
aggattggccagaacaaagctgtgaaggtttatagactaataacaaggaattcctatgaa
cgagagatgtttgaccgggcaagcctaaagttgggcttggacaaggctgttctacaaagt
atgagcggaagagaaaacagcgtaggagggattcagcagctttcaaagaaagaaatagaa
gaccttctgaggcgaggagcatatggtgccatcatggatgaggaggatgaaggctcaaag
ttctgtgaagaagacattgaccaaatccttcagaggaggactaagaccattaccatagaa
tctgaaggaagagggtcaacatttgccaaggccagttttgtagcttctggcaacagaact
gacatctcattggatgatccgaacttctggcaaaaatgggctaaaaaggcagaaattgac
ttggattcggcgagtggaagaaatagcctggttattgacaccccgaggattcgcaaacag
acccggcccttcagcgccaccaaagatgaactggcggagctgtctgaagcggagagtgaa
ggagatgacaagcccaagctacggagaccatatgatcggtccagtggctatggcaggacg
gagtgcttccgtgttgagaagaacctgttggtctatgggtggggaagatggagagacata
ctgtcacatggccgcttcaagaggcagctaaatgagcaggacgttgaaataatctgtcga
gctttgctggcttattgcctggtgcactacaggggagatgaaaagatcaaaagcttcatc
tgggacctcatcacgccaactgaagatggtcggacgcgggagttacagaaccatcttggc
ctgtctgctccagtaccccggggcaggaaggggaagaaggtaaagacccagactagtacc
tttgacatccacaaggctgaatggctgcggaaatataacccagaacacctcctacaagac
gacgggtataaaaagcacttaaagcatcactgcaacaaggttctgctgagggtgagaatg
ctgtattatctcaagcaggaagtgattggtcctcacagcaaaaatgttcttgatggagtg
gatgtccgtgaaattgatttacgggttccagagcccgatcattcagagttaccagtaaat
tggtgggatgcagatgcggataagtcgcttctcattggcgtgtttaagcatggctatgag
aaatacaacactatccgggcggatccagctctttgcttccttgaacgggctggcaagcca
gacgaaaaagctgttgctgcagaacagagagctaatgattatattgacggtgatgttgaa
gatcctgagtacaaacctgctcctgccttatttaaagacgacatggaggatgatgcctcg
tctcctggtgatctagttatagcagatggagatggacagggtcaggaaggagacaaaggc
tactggcccacacagtccacactgaccacccgcttgcggaggcttataaccgcattccaa
cgcacttccaagtttcggcagattcagcaaatcccacccatgtttcccattcacacaact
gtaacacaacaagcaccttacgaagaggtttctctcaatccgaaagtggctgcaaaaatt
gaaagacagcagaggtggacccgaagggaggaagctgacttttacagagtagtctcaaca
tttggcgtagtatttgacccaggaagaggtcagtttgattggaccaagtttcgagcaatg
gcaagacttcataagaaaacggacgagagtcttgagaagtacctctatgcctttatagca
atgtgccggagggtgtgtcggctgccttctaaagaagacttagcagagtcccccatctct
atccagccgatcacagaagagcgagcctccagaacgttgtaccgtattgagcttctgagg
aaggtgcgcgaacaagctatccgccacccacagctgtttgaacgcttaaagctctgccag
cctagccctgatttaccggtatggtgggaatgtggcagtcatgataaggatttggtaatt
ggagctgctaaacatggtgtaagcagaactgactataacattctgcgggatccagaactt
tcctttatggtgtctcaaaggaattataaccagaataaagggacctcctctactccgctt
atagcccagtcaaaccaactgctgttgtcaacatctcctcttactcctcaatcaaggacg
caggatataaaagggagcccaaacgatgaggtcagggttagagatgatactgtaaaggat
gagacttcttcttttaaggaagagtctgcaaaaatgaaagtagaggaagttagtctcatc
aatggtccattgcttcacactggagaacacaagtcaaccattaagtcggaggcgagcagg
cgtatggtggcagcaaggactgagccactaactcctaatctaacttccaagaaacagaga
atcagcaagcgagggtcagcctccagttcaggctctgattctgactcgaaccgatcgtct
tgttcatccagatcttcctcttcctcatcttcttcctcctcctcttgctcgcgttcagga
tccagctcttcctcttcttcctcttcatgttcatcatcctcatcgtcttcctcctcttct
tcatcctcgtcatcttcatctgaggacagtgacagtgatggggatgtgcagaaaagtgaa
cgagtgccgcatgtaaaagcctatgatgaagagagtgtggcctctatgagtaccatacag
gatgaaactcaggacagcttccagttagacaatggaacacctaactctaactaccttgta
caagggggatatctgtttgctgctgcccattggccaaaggatcgagtggtaatcaacaga
ctggacagtatttgccaggcagtattgaaaggaaaatggcccactacccgaagaaactat
gatggtaccagtgtggcatctttctataccaccaaactactggatagctctggggctgcc
atggagtacagtgagccaagtccacaggtggccacctgcgttgccatcaaggaagaaccc
aaccaattgccacagatgtcaaaggtgaagaagcatgtacaagaaaaggagtttacagtg
aaaatcaatgacgaaagtggcttaaaattgacatttcaaaagcaagggataccacagaaa
aggccgctggacagtgaggaaggaatgggacagcagcaatatttggctcgactgcaagat
ctccagaatgcatcagagactagtcttgtaaactttcccaaatctactgcagctttaggt
acatccagtatggtgcctccaagtgacaacatgaatggcatattgacagaaacgcaaccg
gttgtcaagaaaagaagaggtagaaggaagaatgtggaaggagtggatattctatacatg
aacagaaataagacacttaatcatgtcaacccaattgcctctccctccctgccacagcct
gcaacatgcccccaggtgcacttgggcccccaacgagcattggatgcagacagccctgta
tcggtcattaacttaaaggatggcacaaggcttgcgggagatgatgccccaaaaaggaag
gatctagagagctggctaaaagcgcaccccaattatgtggaagatctgggtgcatttatc
cctaggatgcagcttcatgaaggtaggcctaagcagaaacggcaccgctgcaggaatccc
aacaagctggatgtgaacagccttacaggagaggagcgtgttcagctgatcaacaagaga
aatgccaggaaggttgggggtgcatttgctcctcctctgaaagacctgtgtcgctttctg
aaggaaaatccagaatacggagtggcccccgagtggggagatgttgtaaagcaatctggt
tttctcccagatagcatgtttgatcgcatcttgactggccctgtggtgcgtgaggaagtg
agcagaagagggaggaggccgaaaagtgagattgccaaagccgcagctgccacatctgca
ggcagctctgggaatgtgacctcactgatagcaaatggcctgatcccaggtatggatcta
gccagctaccaagcactacagcagaacttccagagcctccaatctctacagttgacagct
ggattaattggtttacctgcaggactctcagcatctggtggggatgcaaaaaacatggcc
gccatgttccctatgttgttgtccggtatggctggattacccaatctgttgggtatggga
aacctgttgaataagtcttcagacccttgtcctgaggggaaagagaagaactgcacaaat
gactgcaaagaaactgagaacaacagcgagaggacgatatctcctgccagtgacaaaccc
aagcaaaactctagccctccttccacatcaatgggaactgcactgcgagcaggctcctta
tcgctcaacccactgttgttacccaatataatctacccagggatgctcctcactccaggc
cttaatcttcacatcccagctgtgtcccagcctaatgttttcgatgtacaaaatactaaa
aaaggcaatggcccagttcaggctccagattccacagcagaaccgactcctgctcccagt
ctggaaggaaaagctgggaatgaggttgcctctcaaaacgaaaacagcacagacgaaggt
tctgagaaggcagacccttcatcaggatcaaatagtccctcgtcgtcttcatctgaagac
tcagactcttcggaggaggactaa
DBGET
integrated database retrieval system
