Pseudophryne corroboree (corroboree frog): 134970296
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Entry
134970296 CDS
T11513
Symbol
LRRC4C
Name
(RefSeq) leucine-rich repeat-containing protein 4C
KO
K07523
netrin-G1 ligand
Organism
pcob Pseudophryne corroboree (corroboree frog)
Pathway
pcob04514
Cell adhesion molecule (CAM) interaction
pcob04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
pcob00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
134970296 (LRRC4C)
04517 IgSF CAM signaling
134970296 (LRRC4C)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pcob04515
]
134970296 (LRRC4C)
Cell adhesion molecules [BR:
pcob04515
]
Immunoglobulin superfamily
NGL family
134970296 (LRRC4C)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
LRR_1
Ig_3
ig
LRR_14
LRR_9
V-set
Ig_2
LRRNT
LRR_LRWD1
DUF7617
Sp38
Ig_6
Syndecan
Motif
Other DBs
NCBI-GeneID:
134970296
NCBI-ProteinID:
XP_063802347
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All DBs
Position
11:8380468..9785971
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AA seq
639 aa
AA seq
DB search
MLNKMTLHPQQMMIGPRFNRALFDPLFIVLLALQLLVVAGLVRAQTCPSVCSCSNQFSKV
ICTRRNLREVPDGISTNTRQLNLHENQIQIIKVDSFKHLRHLEVLQLSRNHIRTIEIGAF
NGLANLNTLELFDNRLTTIPNGAFEYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLG
EMKRLSYISEGAFEGLSNLKYLNLGMCNLREIPNLTPLVKLDELDLSGNHLSVLRPGSFQ
GLTHLQKLWIMHSQIQVIERNAFDDLQSLVELNLAHNNLTLLPHDLFTPLHNLQRIQLHH
NPWNCNCDILWLSWWLKEIVTTGSTCCARCSTPANLKGTHIAELDQNYFTCYAPVILEPP
TDLNVTEGMAAELKCRASTSLTYVSWITPNGSIMTHGAYKVRISVLNDGTLNFTNVTVRD
TGLYTCIVSNSAGNTTASATLNVTATDTGYTYFSTVTVETMEPSQDEARTTDHHVGPTPV
IDWETTNATTSLMPHSTRSTEKPFTIPVTDANSGMPGIDEVMKTTKIIIGCFVAITLMAA
VMLVIFYKMRKQHHRKNHHAPTRTVEIINVDDELTADTPIESHLPMPAIEHEHLNHYNSY
KSPFNHTTTVNTINSIHSSVHEPLLIRANSKDNVQETQI
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atgttgaacaagatgacattacatccacagcagatgatgataggtcctaggttcaacagg
gccttatttgaccccctttttattgtgctgttggctctccagcttctcgtggtggccggc
ttggtcagagcgcagacctgcccttccgtatgttcttgcagtaatcagttcagcaaagtt
atttgcacacggagaaacctgcgcgaggttccggatggtatatccaccaacacgaggcag
ctgaaccttcatgaaaaccagatccaaataatcaaagtggacagttttaaacacttacga
cacttagaagttttacagttgagtaggaatcacattaggacgattgaaattggggccttc
aatggcttggccaacttaaacacgttagaactgtttgacaataggctgactaccattcca
aatggagcttttgaatatctgtcaaaactgaaagagctttggctgcggaacaaccccatt
gagagcatcccatcttatgcttttaatcgcatcccgtcactgcgtcggttggatttgggg
gaaatgaaaagattgtcatatatttcagaaggagcatttgaagggctttcgaaccttaaa
tatttgaaccttgggatgtgcaacctaagagaaatacccaaccttacccctctcgtgaaa
ctagatgagttagatctttctgggaaccatctgtcggttctcagaccaggatcattccaa
ggattaacccatttgcaaaaattgtggattatgcattcccaaattcaggtgattgagcgg
aatgcctttgatgatctacagtcgcttgtggaacttaatttggcacataataatctaact
ttactgcctcatgacctgttcacacctctccataatttgcaaaggattcaattgcaccac
aatccctggaactgcaactgtgacatactttggctgagctggtggctaaaagaaatagtc
actaccggcagcacatgttgtgctcgttgcagcactccggccaatctaaaaggtactcac
attgcagaactggaccagaattattttacgtgttatgcccctgtgattttggagccaccc
actgatctgaatgtcacagaagggatggccgctgaactcaaatgtcgggcatcaacatca
ttgacttatgttagttggattactcctaatggctccattatgacccatggggcttacaaa
gtacgaatatctgtgcttaatgacggcacactaaactttacaaatgtaacagtgcgagat
acgggattgtacacgtgcatagtgagtaactctgcagggaacaccactgcctcagcgaca
ctgaatgtgaccgcaaccgatactggttacacatacttttccaccgtcactgtagagaca
atggaaccatctcaggatgaggcgaggaccacggatcatcatgtaggccctacaccagtc
attgactgggaaaccacaaatgcaaccacctcgctaatgcctcacagcacaaggtccaca
gagaaacccttcaccatcccagtcacggatgcaaatagtggaatgccaggtatagatgaa
gttatgaagaccaccaaaattataattggctgctttgtggccatcaccctaatggcagcc
gtcatgttggttattttctacaagatgaggaaacagcaccacagaaagaaccaccacgct
cccacgcggactgttgagattataaacgtggatgatgaactaaccgctgacactcccatt
gagagccacttgcccatgcccgcgattgaacacgagcatttaaaccactataactcttat
aagtccccttttaatcacacaacaacagtgaacacaataaattcaatacacagctctgtg
catgaacctttactgattcgcgcaaactctaaggacaatgtacaggagacgcagatctga
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