Pseudophryne corroboree (corroboree frog): 134970340
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Entry
134970340 CDS
T11513
Symbol
GTF2H1
Name
(RefSeq) general transcription factor IIH subunit 1 isoform X1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
pcob Pseudophryne corroboree (corroboree frog)
Pathway
pcob03022
Basal transcription factors
pcob03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pcob00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
134970340 (GTF2H1)
09124 Replication and repair
03420 Nucleotide excision repair
134970340 (GTF2H1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcob03021
]
134970340 (GTF2H1)
03400 DNA repair and recombination proteins [BR:
pcob03400
]
134970340 (GTF2H1)
Transcription machinery [BR:
pcob03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
134970340 (GTF2H1)
DNA repair and recombination proteins [BR:
pcob03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
134970340 (GTF2H1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BSD
PH_TFIIH
Motif
Other DBs
NCBI-GeneID:
134970340
NCBI-ProteinID:
XP_063802416
LinkDB
All DBs
Position
11:complement(19704960..19745410)
Genome browser
AA seq
547 aa
AA seq
DB search
MATSSEEVLLIVKKVRQKKQDGALYLMAERIAWAPEGKDRFTVSHLYGDIKCQKISPDGK
AKVQLQLVLHAGESTNFHFSNDSTAIKERDAVKELLQQLLPKFKRKANKELEEKNRMLKE
DPLLFQLYKDLVVSQVISAEEFWANRLSLTSLESAVSNNKQDVGISAAFLADVRPQTDGC
NGLRYNLTPDIIESIFRTYPAVKLKYDENVPHNMTEKEFWTRFFQSHYFHRDRLNTGSKD
LFAECAKLDEKGLKSLVSQGVRNPMLDLLSLEDKCLDEGYGISSVPSTSNAKSVKENSNA
AIIKRFNHHSAMVLAAGLRKEEAQNDQNSETSSADGNSRDSDFFQPPIKKVKLQEAIDYE
DLGEGNGIKPIALTLKKSDRYYHGPTPVQSQQYTTSQDIINSLNSIKQQMENYVPRLTQV
LSSGAASITVSALSPGGALMQGGGQQSINQMVPNDIQSELKHLYVAVGELLRHFWSCFPV
NTPFLEEKVIKMRNNLERFQVTKLCPFQEKVKKQYLSTNLTSHLEEMLQTAYNKFQMWQS
RRMLKKT
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggctacgtcctcggaagaagtgctgctgatagtgaagaaagtgcgtcagaagaagcaa
gatggggccctctacctaatggcggaaaggatcgcctgggcccccgagggcaaggaccgc
ttcacagtgagccacctgtatggagacatcaagtgtcagaagatcagccccgatggcaaa
gcgaaggtccagctccagcttgtcctccatgcgggagagtccactaacttccatttctcc
aatgacagcacagcaataaaagagagggacgccgtgaaagagctgctgcagcagcttctg
cccaagttcaagaggaaggccaacaaggagctggaagagaagaacaggatgctgaaggag
gatcccctattgttccaactctacaaggaccttgttgtcagtcaggtgatcagcgccgag
gagttctgggccaatcgcctgagtctgacctcgctggagagcgcagtgtctaacaacaag
caagacgtggggatctcggctgccttcctggcggatgttcgtccccaaactgacggctgc
aatggtctgagatacaacctgactccagatatcattgagtccatcttccgcacatatcct
gcagtaaagctcaagtatgatgagaatgttccccacaacatgacggagaaggagttctgg
acccgctttttccagtctcactacttccacagagaccgacttaacacgggatcaaaagac
ttgtttgcggaatgcgccaagctggatgagaaaggtctgaaatccttggtgtctcaaggg
gtgagaaatccaatgttagacttattgtcgctggaagacaagtgtctggatgagggatac
ggtatttcctcggtgccgtccacctcaaacgcaaaatccgtgaaagagaacagcaacgcc
gccatcatcaaacgattcaaccatcacagcgccatggtgctggcagcaggactccggaaa
gaagaagcacaaaatgaccagaacagcgagacgagtagcgcagacggtaactcccgggac
tccgatttctttcagccccctataaagaaggtgaagctgcaggaagccatagattatgaa
gatttgggggaaggtaacggtataaaaccaatagcgctaactctcaagaaatccgatagg
tattatcatggtccaaccccagtccagtcccagcaatacacaacaagccaggatattatt
aactctcttaatagtattaaacaacaaatggaaaactatgtaccaagactaactcaggtt
ctttcaagtggtgctgctagtattacagtctctgcgttgtcccccgggggagcgttgatg
caggggggaggccagcaatccataaaccagatggtgccaaacgacatccagtctgagctg
aaacacttgtacgtggctgtgggtgaattgcttcgccacttctggtcctgcttccccgtc
aatacccccttcttagaggaaaaggttattaaaatgaggaataacttagaaaggttccaa
gttaccaaactgtgtccattccaagagaaagtgaaaaagcaatacctgagcacaaacctc
acaagtcacttagaagaaatgctacagacggcctacaacaaattccagatgtggcagtct
cggcgtatgttgaagaagacgtga
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