Pseudophryne corroboree (corroboree frog): 134980401
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Entry
134980401 CDS
T11513
Symbol
SRSF5
Name
(RefSeq) serine/arginine-rich splicing factor 5
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
pcob Pseudophryne corroboree (corroboree frog)
Pathway
pcob03040
Spliceosome
pcob05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
pcob00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
134980401 (SRSF5)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
134980401 (SRSF5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pcob03041
]
134980401 (SRSF5)
Spliceosome [BR:
pcob03041
]
Common components
Common spliceosomal components
SR proteins
134980401 (SRSF5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
Nup35_RRM_2
RRM_5
DUF7376
Motif
Other DBs
NCBI-GeneID:
134980401
NCBI-ProteinID:
XP_063803273
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All DBs
Position
12:23548610..23553109
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AA seq
292 aa
AA seq
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MSGCRVFIGRLNPAAREKDVERFFKGYGRIRDIDLKRGFGFVEFEDPRDADDAVYELDGK
ELCSERVTIEHARLRSRGGGGGGGGGGGGGGGGRGMGGGRGRYSDRFSSRRPRNDRSAPP
IRTENRLIVENLSSRVSWQDLKDFMRQAGEVTFADAHRPKLNEGVVEFASYSDLKNAIEK
LSGKEINGRKIKLIEGTKRHSRSRSRSRSRSRSSSRSRSRSRSRSRKSYSRSRSRSRTPR
SNHSNRSKSRSVSRSPVPEKAPMAASRSPSKSPASADHQRSRSRSRSVDSRN
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgagtggttgcagagtgttcatcggtcgcctgaacccagctgccagagagaaggacgta
gaacggttcttcaagggctatgggagaatccgagacattgacttaaaaagagggtttgga
tttgtggagtttgaagatccaagagatgcggatgatgcagtttatgagcttgatggcaag
gagctctgcagtgaacgggttaccattgagcatgcccgcctacgttccagaggtggtggt
ggtggtggaggcgggggcggtggcggtggtggtggtggaagaggcatgggaggaggaagg
ggaagatattctgatcgattcagtagcagacgcccacgtaatgatagaagtgctccccca
ataaggaccgagaaccgtctcatagtagagaacttgtcgtccagagtgagctggcaggat
ttgaaagacttcatgagacaagctggtgaagttacgtttgctgatgcgcacagaccaaag
ctgaatgaaggggttgtggagtttgcatcctacagtgatcttaaaaatgccattgagaaa
ctctctggcaaagaaataaatgggcgaaaaatcaagctcattgaaggaaccaagcggcac
agcaggtcaaggagccgatctcgttcccgcagcaggagctcatccaggtctcgcagccgc
tcccgctctaggagcaggaagtcttacagccggtctcgtagccgcagccgtactcctcgc
agtaaccatagcaaccgcagcaaatccaggtctgtcagtaggtctcccgttccagaaaaa
gcccctatggctgcctctaggagcccatcgaagtccccagcatctgctgatcaccagagg
tctcggtcgagatctagatctgttgatagcagaaactga
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